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  5. Solyc07g054220.1.1

Solyc07g054220.1.1 (Solyc07g054220)


Aliases : Solyc07g054220

Description : transcription factor (DREB)


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g054220.1.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00135920 HRE2,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AT1G50640 ATERF3, ERF3 ethylene responsive element binding factor 3 0.11 OrthoFinder output from all 47 species
AT1G53170 ATERF8, ATERF-8, ERF8 ethylene response factor 8 0.11 OrthoFinder output from all 47 species
AT1G71520 No alias Integrase-type DNA-binding superfamily protein 0.01 OrthoFinder output from all 47 species
AT3G16770 ERF72, EBP, ATEBP, RAP2.3 ethylene-responsive element binding protein 0.02 OrthoFinder output from all 47 species
Adi_g013120 ATERF11, ERF11 subgroup ERF-VIII transcription factor & original... 0.01 OrthoFinder output from all 47 species
Adi_g016417 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g034904 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g036820 ERF72, EBP, ATEBP, RAP2.3 transcription factor component *(HRE/RAP2.12) of... 0.01 OrthoFinder output from all 47 species
Adi_g073952 tny subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Adi_g074655 HRD subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Adi_g111958 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Adi_g119481 ATERF4, RAP2.5,... subgroup ERF-VIII transcription factor & original... 0.07 OrthoFinder output from all 47 species
Ala_g07170 AtERF48, DREB2C subgroup ERF-IV/DREB2 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Als_g37025 DEAR3 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.01 OrthoFinder output from all 47 species
Als_g37615 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g39098 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.01 OrthoFinder output from all 47 species
Als_g48568 ERF110 subgroup ERF-X transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Als_g49053 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.01 OrthoFinder output from all 47 species
Als_g50026 TINY2 subgroup ERF-III transcription factor & original... 0.01 OrthoFinder output from all 47 species
Als_g51423 HRE2 subgroup ERF-VI transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g51447 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.01 OrthoFinder output from all 47 species
Als_g62202 No alias subgroup ERF-III transcription factor & original... 0.11 OrthoFinder output from all 47 species
Aob_g03300 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g01204 No alias subgroup ERF-I transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g03440 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Aop_g07222 No alias subgroup ERF-I transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene24390.t1 RAP2.1, Aspi01Gene24390 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene24392.t1 RAP2.1, Aspi01Gene24392 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene25575.t1 DEAR1, CEJ1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene37405.t1 Aspi01Gene37405 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene39104.t1 Aspi01Gene39104 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene49926.t1 ATERF12, ERF12,... subgroup ERF-VIII transcription factor & original... 0.01 OrthoFinder output from all 47 species
Aspi01Gene53898.t1 Aspi01Gene53898 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene53899.t1 Aspi01Gene53899 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene53919.t1 Aspi01Gene53919 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene63655.t1 HRE2, Aspi01Gene63655 transcription factor component *(HRE/RAP2.12) of... 0.01 OrthoFinder output from all 47 species
Cba_g13419 CRF3 subgroup ERF-VI transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.24G042900.1 DEAR2, Ceric.24G042900 subgroup ERF-II transcription factor *(ERF19/20) &... 0.02 OrthoFinder output from all 47 species
Ceric.24G043300.1 Ceric.24G043300 not classified & original description: pacid=50629223... 0.02 OrthoFinder output from all 47 species
Dac_g02023 TINY2 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dac_g06435 No alias subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dac_g14308 No alias subgroup ERF-I transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g37743 No alias subgroup ERF-IV/DREB2 transcription factor & original... 0.01 OrthoFinder output from all 47 species
Dac_g46449 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g25479 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dde_g27595 DEAR4, RAP2.10 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.01 OrthoFinder output from all 47 species
Ehy_g00934 ERF72, EBP, ATEBP, RAP2.3 transcription factor component *(HRE/RAP2.12) of... 0.01 OrthoFinder output from all 47 species
Ehy_g18210 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01019860001 ddf2 External stimuli response.temperature.ICE-CBF cold... 0.02 OrthoFinder output from all 47 species
GSVIVT01021098001 ATERF4, RAP2.5,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
GSVIVT01028050001 HRE2 RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 OrthoFinder output from all 47 species
Gb_01210 No alias transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Gb_01211 No alias transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Gb_01212 No alias transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Gb_01213 No alias transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Gb_01215 ORA47 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Gb_01221 No alias transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Gb_12965 ERF110 Ethylene-responsive transcription factor ABR1... 0.02 OrthoFinder output from all 47 species
Gb_24328 HRD transcription factor (DREB) 0.01 OrthoFinder output from all 47 species
Gb_26667 ATERF3, ERF3 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
Gb_26738 DREB26 transcription factor (DREB) 0.01 OrthoFinder output from all 47 species
Gb_36619 DEAR3 Ethylene-responsive transcription factor ERF008... 0.01 OrthoFinder output from all 47 species
LOC_Os01g64790.1 ERF110, LOC_Os01g64790 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os03g15660.1 DREB26, LOC_Os03g15660 Ethylene-responsive transcription factor ERF012... 0.03 OrthoFinder output from all 47 species
LOC_Os04g46410.1 ERF38, ATERF38,... transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
LOC_Os11g13840.1 tny, LOC_Os11g13840 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Len_g01640 DEAR4, RAP2.10 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Len_g07511 CRF3 subgroup ERF-VI transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Len_g08670 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Len_g11014 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g03871 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.01 OrthoFinder output from all 47 species
MA_166248g0010 ERF-1, ATERF-1 transcription factor (ERF) 0.5 OrthoFinder output from all 47 species
MA_5805979g0010 ERF-1, ATERF-1 Ethylene-responsive transcription factor 1A... 0.06 OrthoFinder output from all 47 species
MA_938274g0010 ERF-1, ATERF-1 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Nbi_g07909 TINY2 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ore_g06350 RAP2.12 transcription factor component *(HRE/RAP2.12) of... 0.04 OrthoFinder output from all 47 species
Ore_g37778 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g17077 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.04 OrthoFinder output from all 47 species
Pir_g35803 TINY2 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pnu_g02380 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pnu_g05242 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pnu_g34102 ORA47 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32689 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0241.g026632 No alias not classified & original description: CDS=67-2787 0.01 OrthoFinder output from all 47 species
Sam_g07944 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29719 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g32611 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc07g064890.1.1 ATERF3, ERF3,... transcription factor (ERF) 0.08 OrthoFinder output from all 47 species
Spa_g15143 No alias subgroup ERF-IV/DREB2 transcription factor & original... 0.01 OrthoFinder output from all 47 species
Spa_g18741 CRF3 subgroup ERF-VI transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e034242_P001 RAP2.12, Zm00001e034242 transcription factor (ERF) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 181 229
No external refs found!