Solyc07g053990.4.1 (Solyc07g053990)


Aliases : Solyc07g053990

Description : no hits & (original description: none)


Gene families : OG0001079 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001079_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g053990.4.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00125550 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT5G14540 No alias Protein of unknown function (DUF1421) 0.07 OrthoFinder output from all 47 species
Ala_g06950 No alias E4 polyubiquitination factor *(UAP) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene46928.t1 Aspi01Gene46928 E4 polyubiquitination factor *(UAP) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene59735.t1 Aspi01Gene59735 E4 polyubiquitination factor *(UAP) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0054.g033608 No alias E4 polyubiquitination factor *(UAP) & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0157.g053832 No alias E4 polyubiquitination factor *(UAP) & original... 0.09 OrthoFinder output from all 47 species
Ceric.14G096500.1 Ceric.14G096500 E4 polyubiquitination factor *(UAP) & original... 0.04 OrthoFinder output from all 47 species
Ceric.23G080900.1 Ceric.23G080900 E4 polyubiquitination factor *(UAP) & original... 0.04 OrthoFinder output from all 47 species
Dac_g11754 No alias E4 polyubiquitination factor *(UAP) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g02947 No alias E4 polyubiquitination factor *(UAP) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g02201 No alias E4 polyubiquitination factor *(UAP) & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01020546001 No alias No description available 0.05 OrthoFinder output from all 47 species
GSVIVT01032424001 No alias No description available 0.09 OrthoFinder output from all 47 species
MA_72903g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp5g12800.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g05380 No alias E4 polyubiquitination factor *(UAP) & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g00949 No alias E4 polyubiquitination factor *(UAP) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g16375 No alias E4 polyubiquitination factor *(UAP) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g35173 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0169.g024333 No alias E4 polyubiquitination factor *(UAP) & original... 0.03 OrthoFinder output from all 47 species
Sam_g12481 No alias E4 polyubiquitination factor *(UAP) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g19222 No alias E4 polyubiquitination factor *(UAP) & original description: none 0.04 OrthoFinder output from all 47 species
Smo446314 No alias No description available 0.05 OrthoFinder output from all 47 species
Spa_g49436 No alias E4 polyubiquitination factor *(UAP) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g10516 No alias E4 polyubiquiTination factor *(UAP) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g12932 No alias E4 polyubiquiTination factor *(UAP) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e016775_P001 Zm00001e016775 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e025871_P001 Zm00001e025871 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP HCCA
BP GO:0017003 protein-heme linkage IEP HCCA
BP GO:0017004 cytochrome complex assembly IEP HCCA
BP GO:0017006 protein-tetrapyrrole linkage IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR010820 DUF1421 446 490
No external refs found!