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  5. Solyc07g051960.3.1

Solyc07g051960.3.1 (Solyc07g051960)


Aliases : Solyc07g051960

Description : chromatin remodeling factor (Rad5-like)


Gene families : OG0002085 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002085_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g051960.3.1
Cluster HCCA: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01012697001 No alias Chromatin organisation.chromatin remodeling... 0.04 OrthoFinder output from all 47 species
Len_g14364 No alias chromatin remodeling factor *(Rad5-like) & original... 0.02 OrthoFinder output from all 47 species
Solyc07g041430.3.1 Solyc07g041430 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Solyc07g052020.2.1 Solyc07g052020 chromatin remodeling factor (Rad5-like) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR000330 SNF2_N 249 304
IPR001650 Helicase_C 559 671
IPR000330 SNF2_N 73 238
IPR000330 SNF2_N 339 451
No external refs found!