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  5. Solyc07g049120.2.1

Solyc07g049120.2.1 (Solyc07g049120)


Aliases : Solyc07g049120

Description : transcription factor (PLATZ)


Gene families : OG0000228 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000228_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g049120.2.1
Cluster HCCA: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
Als_g08279 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g29786 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g33370.1 LOC_Os01g33370 transcription factor (PLATZ) 0.03 OrthoFinder output from all 47 species
LOC_Os02g09070.1 LOC_Os02g09070 transcription factor (PLATZ) 0.03 OrthoFinder output from all 47 species
LOC_Os09g02790.1 LOC_Os09g02790 transcription factor (PLATZ) 0.03 OrthoFinder output from all 47 species
LOC_Os09g03080.1 LOC_Os09g03080 transcription factor (PLATZ) 0.03 OrthoFinder output from all 47 species
Smo425306 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.02 OrthoFinder output from all 47 species
Solyc02g033090.1.1 Solyc02g033090 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc02g036200.1.1 Solyc02g036200 transcription factor (PLATZ) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008171 O-methyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR006734 PLATZ 59 133
IPR000315 Znf_B-box 16 56
No external refs found!