Heatmap: Cluster_145 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule (0-1 DPA)
Ovule (2 & 5 DPA)
Ovary
Microspore
Generative cell
Pollen
Sperm cell
Pollen grain
Pollen tube
Pollen tube (1.5h)
Pollen tube (3h)
Pollen tube (9h)
Pistil
Style (before flowering)
Style (after flowering)
Style (pollinated, after flowering)
Flower (buds)
Flowers
Ovary wall/pericarp (0-1 DPA)
Ovary wall/pericarp (2 & 5 DPA)
Pericarp/Exocarp (4 DPA)
Pericarp
Pericarp (5 DPA)
Pericarp (7 DPA)
Pericarp (10 DPA)
Fruit (mature green)
Fruit (breaker stage)
Septum (7 DPA)
Septum (10 DPA)
Septum/Seed (4 DPA)
Seed (5 DPA)
Seed (7 DPA)
Seed (10 DPA)
Seeds (10 DPA)
Seeds (20 DPA)
Seeds (30 DPA)
Seeds (Pk-stem)
Seeds (Br-stem)
Seeds (Pk-equatorial)
Seeds (Pk-stylar)
Seeds (Br-stylar)
Seeds
Seeds (RR)
Seeds (LR)
Seeds (MG-equatorial)
Hypocotyl
Seedling (leaves)
Seedling (roots)
Callus
Meristem (vegetative)
Meristem
Apical meristem
Leaf
Root
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
Root hair cells
-3.44 -9.83 -3.9 - -3.92 - -2.12 -1.8 -1.89 -5.29 -4.95 -5.1 -5.9 -4.12 - -3.99 - - - - -2.9 - -4.97 -3.05 -3.56 -4.22 - -4.98 - -4.06 -7.19 -1.35 2.46 5.16 3.18 0.57 -0.71 0.03 -0.5 -3.2 -1.28 -0.59 -2.35 - -1.29 - -6.0 - - - - - -7.72 - - - - -
Solyc01g011273.1.1 (Solyc01g011273)
- - - - - - - -7.37 - - - - - -8.17 - -7.06 - - - - -1.34 - -5.65 -2.52 -2.37 - - -0.69 -1.04 -0.03 -1.46 1.14 1.27 5.58 1.12 - - - - - - - - - -5.69 -8.13 - - -8.26 - - - -9.77 - - - - -
Solyc01g066130.1.1 (Solyc01g066130)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 5.69 - - - - - - - - - - - - - - 2.71 - - - - - - - - -
-3.3 -0.53 -2.51 -3.57 - - - - - -8.99 - - -2.12 - - - -4.08 -7.16 - - -2.44 - -3.1 -2.44 -2.64 -6.97 -6.55 -1.27 -2.27 -0.66 1.2 1.47 2.32 5.19 2.77 -0.34 - -5.76 -4.81 -4.35 - -4.14 -3.77 -4.78 -3.19 - - - -4.9 -4.32 -6.16 - -7.57 -4.78 - - - -
Solyc01g090520.3.1 (Solyc01g090520)
- - - -7.5 - - - - - - - - - -8.19 - -9.19 - - - - -2.66 - -4.93 -3.11 -2.56 - - -1.88 -1.12 -0.75 -1.24 0.89 1.83 5.32 3.36 -2.87 - - - - - - - - - - - - - - - - - - - - - -
Solyc01g090523.1.1 (Solyc01g090523)
- - - - - - - - - - - - - - - - - - - - -1.83 - -3.74 -1.71 -1.9 - - -0.43 -2.23 -0.12 0.68 2.32 2.24 5.43 -0.42 - - - - - - - - - - - - - - - - - - - -7.04 - - -
Solyc01g090527.1.1 (Solyc01g090527)
- - - -5.88 - - - - - - - - -6.46 - - - - - - - -2.21 - -4.1 -2.47 -2.14 - - -0.34 -1.06 0.07 -1.26 1.83 2.21 5.47 0.88 -4.66 - - - - - - - - - - - - -6.65 - - - - - - - - -
Solyc02g032140.3.1 (Solyc02g032140)
- - - - -3.16 - - -6.46 -4.96 - - - -4.98 - - - - -4.68 - - -3.66 -1.69 - -2.19 -0.92 -2.05 - -1.76 0.43 -0.43 -1.46 0.72 2.86 4.48 3.74 1.69 -1.17 -0.14 -1.08 -0.87 0.51 -0.25 - - 0.17 - - - -3.25 - - - -5.3 - - - - -
Solyc02g066890.2.1 (Solyc02g066890)
- - - - -2.34 - - - - - - - -3.82 - - - - - - - -0.22 - - -1.55 -1.7 - - -0.66 -0.8 -0.14 - 1.6 2.8 4.95 3.61 -2.04 - - - - - -4.75 - - - - - - -0.74 - - - -6.48 - - - - -
Solyc02g082035.1.1 (Solyc02g082035)
-5.38 -6.62 -5.19 -3.44 - - - - -9.72 - - - -4.67 - -7.54 - - -7.63 - -5.22 -1.1 - -3.72 -1.93 -1.43 - - -0.19 -1.97 0.29 1.27 2.1 1.82 5.41 0.68 -5.79 - - - - - -9.35 - - - - - - - - - - -8.57 - - - - -
Solyc03g034330.1.1 (Solyc03g034330)
-3.56 -3.74 -4.0 -9.54 -7.64 - -7.2 - - -11.64 - - -2.04 -10.28 -10.07 -9.19 -5.95 -6.78 - -8.32 -1.78 -5.71 -6.08 -3.06 -1.65 - -4.96 -1.92 -0.12 -0.48 -1.74 0.65 2.18 4.62 4.53 -3.15 -5.31 -4.56 -4.55 -3.6 -4.23 -4.58 -3.08 -3.06 - -6.07 -9.83 - -10.31 - - -8.3 -10.25 -6.74 -8.04 - - -
Solyc03g112490.1.1 (Solyc03g112490)
-2.85 -3.3 -4.71 - -4.74 - - -10.31 -6.88 -5.58 -5.17 -5.98 -8.22 -4.37 -6.28 -6.13 -4.21 -6.35 -4.14 -5.08 -2.74 -5.74 -3.64 -3.08 -2.39 -4.63 - -2.35 -1.36 -1.45 0.35 0.67 0.4 4.99 4.27 -2.01 -5.41 - -4.32 - - -5.61 - - -5.48 -6.04 -8.3 -5.49 -5.75 -6.4 -7.46 -7.29 -6.16 -5.07 -5.65 -6.9 - -5.18
Solyc04g071210.1.1 (Solyc04g071210)
- - -2.8 - - - - - - -4.63 - -3.64 -1.28 - - - - - -1.23 - -2.3 - - -2.7 -0.96 - -3.61 -3.09 -0.46 -1.48 - -0.94 2.12 4.85 4.39 - - - - - - - - - - - - - -2.47 - - - - - - - - -
Solyc05g006465.1.1 (Solyc05g006465)
- - -3.37 -3.59 - - - - - - - - -1.82 - - - - -6.96 - - -1.29 - - -2.32 -0.86 - - -2.45 0.21 -1.37 -2.85 1.48 3.95 3.74 4.51 - - - - -4.56 - - - - - - - - - - - - - - - - - -
Solyc05g006813.1.1 (Solyc05g006813)
-2.53 -0.43 -2.63 -7.44 -6.53 - - -5.84 -7.94 - - - -0.68 -6.17 -3.64 -2.42 -5.93 -3.3 - - -2.44 - -2.62 -2.4 -2.29 - - -0.93 -2.08 -0.46 1.67 1.95 1.36 5.23 2.71 - - - - - - - - - - -7.33 -7.59 - -8.22 - - -4.7 -5.18 - - - - -
Solyc05g008155.1.1 (Solyc05g008155)
- -2.04 -6.71 -2.82 - - - - - - - - -3.44 - - - -5.04 -4.65 - -6.22 -2.28 - -4.46 -2.16 -1.99 -5.65 - -1.62 -1.46 -0.43 0.17 1.27 2.15 4.08 3.91 1.45 - -3.15 - - -3.4 -1.79 - - 0.15 - - -3.14 - - - - -6.87 -2.59 -4.62 -0.16 3.23 -1.23
Solyc05g009440.2.1 (Solyc05g009440)
-3.46 -2.79 -5.44 -8.26 - - - - -10.91 - - - -3.94 - - -9.8 - -7.06 - -8.03 -2.81 - -1.97 -2.72 -2.75 -6.23 -7.75 -0.8 -2.68 -0.57 2.17 1.3 1.59 5.27 2.74 -2.38 - - - - - -7.22 - - -6.37 - - - -7.38 - - -8.18 -13.01 - - - - -
Solyc05g010200.2.1 (Solyc05g010200)
-0.91 -3.3 -2.83 1.53 -3.71 - - - - - - - 0.1 - - - - -6.03 - - -2.52 - -3.68 -2.61 -1.52 - - -0.71 -0.88 -0.57 1.5 0.81 1.18 4.72 4.1 -3.5 - - - - - -7.03 - - - - - - -5.46 - - - -8.43 - - - - -
Solyc05g010512.1.1 (Solyc05g010512)
- - -6.64 -3.32 - - - - - - - - -6.89 - - - - - - - -1.13 - -3.53 -1.97 -1.59 - - 0.3 -1.02 0.11 -0.27 1.67 1.62 5.45 1.69 - - - - - - - - - - - - - - - - - - - - - - -
Solyc05g012177.1.1 (Solyc05g012177)
- - - - - - - - -9.09 - - - - - - - - - -5.25 - -1.62 - -7.15 -2.62 -2.08 - - -1.32 -0.5 -0.32 -2.48 1.03 2.3 5.19 3.55 - - - - - - - - - - - - - - - - - - - - - - -
Solyc05g013830.1.1 (Solyc05g013830)
- - - - - - - - - - - - - - - - - - - - 0.29 - - -2.01 -2.63 - - - -2.32 0.6 - 0.94 3.2 5.2 1.83 - - -0.35 - - - - - - - - - - 0.94 - -1.51 - -5.21 - - - - -
Solyc05g013840.1.1 (Solyc05g013840)
- - - -1.08 1.43 - - - - - - - -0.3 - - - - - - - 0.25 - - -2.59 -1.14 - - -0.58 -2.05 -0.93 - 1.38 2.75 5.21 1.1 - - -0.08 - - - - - - - - - - 0.41 - - - -5.9 - - - - -
Solyc05g053465.1.1 (Solyc05g053465)
- -7.19 - - - - - - -9.09 - - - -6.65 -8.66 - - - - - -8.44 -0.71 - -3.92 -1.95 -1.25 - -8.93 -0.23 -1.14 0.7 0.51 2.43 1.95 5.09 3.14 -4.18 - - - - - -10.17 - - - - - -5.0 -8.43 - - - -11.59 - -4.57 - - -4.56
Solyc05g150107.1.1 (Solyc05g150107)
- - - - - - - - - - - - -10.77 - - - - - - - -2.02 - -6.29 -2.82 -1.63 - -11.1 -2.05 -0.09 -1.41 -2.17 0.62 2.36 5.13 3.78 -6.05 - - - - - -12.51 - - - - - - - - - - - - - - - -
Solyc06g005770.1.1 (Solyc06g005770)
-8.19 -4.42 -6.24 -10.4 -10.76 - - - -15.03 -14.32 - - -7.84 - -13.21 - -8.89 -4.56 -10.91 -12.52 -3.47 -10.04 -4.36 -3.85 -3.38 1.34 -7.85 -2.86 -2.88 -2.08 -0.29 0.02 0.91 5.07 2.89 2.31 -6.01 -6.94 -4.89 -5.53 -3.84 0.13 -6.16 -4.65 1.85 -12.95 -6.68 -6.44 -8.58 - - -8.07 -7.4 -7.35 - - - -6.25
Solyc06g054070.3.1 (Solyc06g054070)
-2.76 -1.63 -1.11 -3.04 -7.18 - -6.42 -13.52 - - -12.51 -12.23 -1.6 -3.99 -3.94 -4.44 -2.21 -2.7 -1.58 -3.45 -1.21 -4.52 -2.13 -0.77 -0.82 -0.66 -4.34 -1.03 -1.62 -0.64 0.17 1.05 1.97 4.97 3.15 0.3 -5.47 -6.2 -5.4 -5.3 -4.03 -3.07 -6.69 -5.69 -1.67 -4.5 -3.35 -3.12 -5.45 -1.93 -1.72 -3.12 -4.86 -3.15 -0.04 -2.87 -5.57 -1.78
-1.62 2.36 -2.89 -1.4 -5.75 -7.43 -7.65 -7.91 -7.21 -6.93 -6.67 -6.98 -2.33 0.32 -1.86 -1.62 -4.29 -5.05 -5.07 -3.68 0.0 -10.02 -1.2 -0.77 -0.14 -2.99 -6.93 0.66 -0.76 0.62 2.07 1.85 1.83 4.76 1.92 -0.96 - -11.08 -9.09 - -7.51 -4.97 -10.1 - -3.36 -11.95 -13.07 - -3.88 -6.57 -9.0 -10.84 -11.27 -8.69 - -11.67 -7.84 -5.74
Solyc07g006395.2.1 (Solyc07g006395)
- -7.94 - -3.31 -7.35 - - - -11.05 - - - -6.03 - - - -8.33 - - - -1.24 - -3.43 -2.24 -2.04 -8.37 - -0.36 -1.53 0.68 0.28 1.86 1.95 5.29 2.66 -6.23 - - - -6.99 - -7.47 - - - - - -7.48 -9.1 - - - -13.14 -7.1 - - - -
Solyc07g049120.2.1 (Solyc07g049120)
- - - - - - - -8.23 -6.11 -5.01 - -5.04 -6.14 -6.87 - - - - - - -1.78 - - -4.18 -1.6 - - -2.79 0.44 -0.72 -3.02 -0.16 2.18 4.74 4.5 - - -3.46 - - - -5.12 - - - - - - -4.14 - - - - - - - - -
Solyc07g056617.1.1 (Solyc07g056617)
- -5.82 - -4.52 - - - - - - - - -7.93 -7.88 -9.25 -6.61 -6.09 -6.3 - - -1.87 -4.36 -2.19 -2.55 -1.77 -5.72 -4.72 -0.18 -1.96 -0.3 1.62 1.21 1.23 5.44 1.69 -1.07 - -7.4 -6.79 - -6.79 -5.64 -7.79 -5.75 -4.62 -7.03 -9.78 - -10.54 - - - -13.02 - -8.27 - - -5.14
Solyc07g056690.2.1 (Solyc07g056690)
-1.44 0.37 -3.64 -0.57 -1.56 - -2.0 -3.34 -4.01 -5.92 -5.04 -6.36 -0.09 -4.03 -3.46 -4.78 -2.71 -1.31 -2.36 -4.66 -1.42 - -3.29 -3.06 -2.63 -2.53 -2.51 -1.32 -1.72 0.06 0.38 0.47 0.06 4.68 3.86 -0.32 -1.33 -1.33 -0.84 -0.05 -1.84 -1.8 -0.77 - -0.59 - - - -0.51 -3.46 -4.98 - -4.32 - -2.18 - -3.98 -
Solyc07g150139.1.1 (Solyc07g150139)
- - - -7.47 - - - - - - - - -5.02 -7.96 -6.23 -7.97 - - - - -1.67 - -4.12 -2.37 -1.7 - - -2.01 -0.27 -1.08 -0.24 1.43 2.81 5.13 3.31 -5.36 - - - - - - - - - - - - -6.66 -5.29 - - -10.4 - - -7.06 -7.1 -
Solyc07g150142.1.1 (Solyc07g150142)
-3.34 -4.23 -2.49 -1.81 -3.72 - - - -5.06 - - - -1.05 - - - - - - - - - - -2.92 -2.38 - - -5.01 -2.32 -4.39 -5.16 -2.66 1.05 5.49 3.16 - - - - - - -7.36 - - - - - - -4.39 - - - - - - - - -
Solyc08g007660.2.1 (Solyc08g007660)
-13.96 - -7.05 -3.24 -8.05 - -8.26 -13.6 -12.91 - - - -8.08 -8.15 -8.1 -7.41 -7.63 -6.18 -8.83 -10.16 -4.24 - -4.92 -4.88 -5.08 -5.36 -9.36 -3.79 -4.84 -3.94 -3.3 -3.23 -2.57 5.59 2.97 -0.95 - -9.21 - -8.33 - -7.91 -8.0 - -6.31 -5.7 -9.84 -3.39 -4.83 -6.3 -7.59 -5.66 -6.31 -4.95 -3.57 -4.23 - -3.79
Solyc08g060973.1.1 (Solyc08g060973)
- - - - - - -10.44 - - - - - - - - - - - - - -1.66 - -5.23 -2.31 -1.7 -10.7 - -1.48 -0.47 -0.33 -0.78 1.27 2.53 5.27 2.98 -6.8 - - - - - -13.1 - - - - - - -9.95 - - - -12.66 - -10.27 - - -
Solyc08g061400.1.1 (Solyc08g061400)
- - - 0.47 -1.44 - - - - - - - -1.44 - - - -1.57 - - - - - - - - - - - - -3.25 - -3.36 -1.68 5.29 3.9 - - - - - - - - - -0.51 - - - -1.33 - - - -7.15 - - - - -
Solyc08g082780.2.1 (Solyc08g082780)
- - -6.62 -6.34 -7.75 - - -11.06 -11.38 - - -11.46 -6.33 - - - - -7.67 - - -3.0 -3.27 -3.65 -3.15 -2.19 -3.73 -9.23 -2.38 -1.72 -1.58 0.44 0.94 1.86 4.78 4.31 0.64 - - - - - -3.22 - - -1.18 - - -5.27 - - - -8.65 -8.72 -7.03 - - - -
Solyc08g150144.1.1 (Solyc08g150144)
-6.23 - -7.58 - - - - - - - - - -5.18 - - - - - - - -0.95 - -5.5 -2.06 -1.57 - - -0.78 -0.58 0.45 -1.71 1.24 2.13 5.46 1.64 - - - - - - - - - - - - - - - - - -9.53 -6.34 - - - -
Solyc09g082090.1.1 (Solyc09g082090)
- - - 2.69 - - - - - - - - -1.63 -1.49 - -2.76 - - - - - - - - - - - - - -0.87 -1.18 -2.36 1.17 5.53 - - - -1.26 - - - - - - - - - - - -2.92 -1.46 - -7.28 - - - - -
Solyc09g083170.3.1 (Solyc09g083170)
- - - -5.27 -7.93 - - -9.48 - - - - - - - - - - - - -1.15 - -4.89 -2.1 -1.08 - - -0.54 -0.03 0.1 -0.56 1.36 2.27 5.12 3.49 -4.95 - - - - - - - - - - - - - - - - - - - - - -
Solyc09g091340.1.1 (Solyc09g091340)
-5.82 -1.96 -6.27 -0.41 - - - - - - - - -3.43 - - -7.45 - -7.07 - - -1.1 - -3.9 -1.95 -1.58 -6.15 - -0.27 -0.44 0.5 0.85 1.84 2.47 4.77 3.78 -3.65 - -5.33 - - -3.18 -7.17 -5.19 -4.14 - - - -2.59 -2.92 - - - -8.95 -2.06 - - - -4.1
-4.08 -3.32 -6.34 -5.05 -5.11 - - -5.75 - - - -6.88 -6.93 -1.33 -0.87 -0.76 - - - - -1.72 -5.64 -6.45 -3.27 -1.71 - -6.93 -1.11 -1.03 -0.51 -0.51 0.68 1.6 4.69 4.39 -0.16 - -3.03 -3.03 -4.54 - -3.08 -1.89 - -3.19 -3.89 - - -6.78 - -6.17 - -6.9 - - - - -
Solyc11g006783.1.1 (Solyc11g006783)
- -2.06 -0.53 -2.6 0.33 - -2.27 - - - -4.61 - -3.17 -4.25 - - - - - - -0.59 - -1.61 -0.98 -1.43 - - 0.41 -1.56 -0.41 2.72 2.24 2.62 5.0 0.33 - - - - - - - - - - - - - - - - - -5.53 - -2.1 - - -
Solyc11g008227.1.1 (Solyc11g008227)
- - -3.79 - - - - - - - - - 1.86 - - - - - - - -3.08 - -2.11 -4.74 - - - -1.77 - -2.66 1.4 0.55 -0.23 5.53 1.21 - - - - - - - - - - - - - - - - - - - - - - -
Solyc11g018625.1.1 (Solyc11g018625)
- - -4.51 -1.5 - - - - - - - - -1.21 - -3.86 -6.11 -6.77 - - - -0.9 - - -2.5 -2.96 - - -1.44 -0.41 0.02 -3.76 1.15 2.17 5.17 3.49 - - - - - - - - - - - - - - - - - - - - - - -
Solyc11g062420.2.1 (Solyc11g062420)
- - - -7.18 -4.64 - - - - - - - -6.92 -4.43 -4.66 -5.63 - -7.72 - - -1.0 - -6.06 -1.66 -0.71 - - -2.11 1.13 -0.83 -2.6 1.41 3.62 4.78 3.42 - - - - - - - - - - - - - - - - - -12.09 - - - - -
Solyc12g056330.1.1 (Solyc12g056330)
-0.34 -1.94 - -2.28 -3.37 - - - -1.9 - - - -3.28 -5.25 -5.38 - - - - -3.05 -3.53 - - -3.54 -1.7 -4.32 - -1.4 -0.55 -0.15 -0.06 0.47 2.18 5.08 3.65 - - - - - - -6.71 - - - -3.16 - - -3.47 - - - -3.5 -2.7 - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.