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  5. Solyc07g047970.4.1

Solyc07g047970.4.1 (Solyc07g047970)


Aliases : Solyc07g047970

Description : Sec12-type guanyl-nucleotide exchange factor (GEF)


Gene families : OG0001951 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001951_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g047970.4.1

Target Alias Description ECC score Gene Family Method Actions
AT2G01470 STL2P, ATSEC12 SEC12P-like 2 protein 0.05 OrthoFinder output from all 47 species
Aev_g07085 No alias phosphate transporter trafficking factor *(PHF1) &... 0.03 OrthoFinder output from all 47 species
Als_g02425 No alias phosphate transporter trafficking factor *(PHF1) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene29224.t1 PHF1, Aspi01Gene29224 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0111.g045610 PHF1 not classified & original description: CDS=422-1426 0.03 OrthoFinder output from all 47 species
Azfi_s0160.g054064 No alias phosphate transporter trafficking factor *(PHF1) &... 0.04 OrthoFinder output from all 47 species
Cba_g00974 STL2P, ATSEC12 phosphate transporter trafficking factor *(PHF1) &... 0.04 OrthoFinder output from all 47 species
Ceric.31G060200.1 Ceric.31G060200 phosphate transporter trafficking factor *(PHF1) &... 0.02 OrthoFinder output from all 47 species
Msp_g01080 No alias phosphate transporter trafficking factor *(PHF1) &... 0.03 OrthoFinder output from all 47 species
Smo416271 No alias SEC12-like protein 2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Zm00001e021182_P001 Zm00001e021182 Sec12-type guanyl-nucleotide exchange factor (GEF) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
CC GO:0072546 EMC complex IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR024977 Apc4_WD40_dom 153 231
No external refs found!