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  5. Solyc07g045230.4.1

Solyc07g045230.4.1 (Solyc07g045230)


Aliases : Solyc07g045230

Description : GBF-interacting protein 1 OS=Arabidopsis thaliana (sp|q8vzs6|gip1_arath : 88.6)


Gene families : OG0000712 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000712_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g045230.4.1

Target Alias Description ECC score Gene Family Method Actions
AT1G29350 No alias Kinase-related protein of unknown function (DUF1296) 0.03 OrthoFinder output from all 47 species
AT3G07660 No alias Kinase-related protein of unknown function (DUF1296) 0.03 OrthoFinder output from all 47 species
Adi_g008163 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g008233 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g025128 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g053981 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g074702 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g087204 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g120900 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g129392 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g11975 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g15111 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g20545 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g04489 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g11714 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0003.g007708 No alias not classified & original description: CDS=120-2903 0.03 OrthoFinder output from all 47 species
Cba_g15326 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G033400.1 Ceric.02G033400 not classified & original description: pacid=50584302... 0.08 OrthoFinder output from all 47 species
Ceric.27G004200.1 Ceric.27G004200 not classified & original description: pacid=50604818... 0.06 OrthoFinder output from all 47 species
Ceric.29G083800.1 Ceric.29G083800 not classified & original description: pacid=50624429... 0.05 OrthoFinder output from all 47 species
Dac_g09171 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01021389001 No alias No description available 0.04 OrthoFinder output from all 47 species
LOC_Os09g08670.1 LOC_Os09g08670 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g03459 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_137710g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_768428g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp4g06750.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Ore_g28851 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0181.g024848 No alias not classified & original description: CDS=93-2615 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0233.g026486 No alias not classified & original description: CDS=154-2919 0.03 OrthoFinder output from all 47 species
Sam_g13683 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29505 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g071180.3.1 Solyc02g071180 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Spa_g08817 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g02140 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e020237_P001 Zm00001e020237 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e022213_P003 Zm00001e022213 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e026550_P001 Zm00001e026550 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e028004_P001 Zm00001e028004 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e032451_P001 Zm00001e032451 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR009719 GIP1_N 15 74
No external refs found!