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  5. Solyc07g043260.4.1

Solyc07g043260.4.1 (FAR1, Solyc07g043260)


Aliases : FAR1, Solyc07g043260

Description : transcription factor (FAR1)


Gene families : OG0002906 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002906_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g043260.4.1

Target Alias Description ECC score Gene Family Method Actions
AT4G38170 FRS9 FAR1-related sequence 9 0.03 OrthoFinder output from all 47 species
GSVIVT01015829001 FAR1 RNA biosynthesis.transcriptional activation.FAR1... 0.02 OrthoFinder output from all 47 species
LOC_Os04g40060.1 FRS6, LOC_Os04g40060 transcription factor (FAR1) 0.02 OrthoFinder output from all 47 species
LOC_Os07g37630.1 FRS7, LOC_Os07g37630 transcription factor (FAR1) 0.03 OrthoFinder output from all 47 species
LOC_Os12g12380.1 FRS5, LOC_Os12g12380 transcription factor (FAR1) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004484 mRNA guanylyltransferase activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006370 7-methylguanosine mRNA capping IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
MF GO:0008192 RNA guanylyltransferase activity IEP HCCA
BP GO:0009452 7-methylguanosine RNA capping IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0036260 RNA capping IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0070568 guanylyltransferase activity IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR007527 Znf_SWIM 154 182
No external refs found!