Solyc07g041190.3.1 (AL5, Solyc07g041190)

Aliases : AL5, Solyc07g041190

Description : Alfin-like transcription factor

Gene families : OG0000258 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000258_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc07g041190.3.1

Target	Alias	Description	ECC score	Gene Family Method
Adi_g019486	AL2	methylation reader Alfin of PRC1 complex & original...	0.03	OrthoFinder output from all 47 species
Aop_g02047	AL1	methylation reader Alfin of PRC1 complex & original...	0.05	OrthoFinder output from all 47 species
Aspi01Gene45906.t1	AL2, Aspi01Gene45906	methylation reader Alfin of PRC1 complex & original...	0.03	OrthoFinder output from all 47 species
GSVIVT01035442001	AL5	RNA biosynthesis.transcriptional activation.Alfin-like...	0.03	OrthoFinder output from all 47 species
Nbi_g04066	AL2	methylation reader Alfin of PRC1 complex & original...	0.03	OrthoFinder output from all 47 species
Ore_g27614	AL2	methylation reader Alfin of PRC1 complex & original...	0.03	OrthoFinder output from all 47 species
Pir_g12876	AL1	methylation reader Alfin of PRC1 complex & original...	0.03	OrthoFinder output from all 47 species
Ppi_g63688	AL2	methylation reader Alfin of PRC1 complex & original...	0.02	OrthoFinder output from all 47 species
Sam_g15782	No alias	methylation reader Alfin of PRC1 complex & original...	0.02	OrthoFinder output from all 47 species
Sam_g38306	No alias	methylation reader Alfin of PRC1 complex & original...	0.05	OrthoFinder output from all 47 species
Spa_g48954	AL1	methylation reader Alfin of PRC1 complex & original...	0.08	OrthoFinder output from all 47 species
Tin_g03128	AL2	methylation reader Alfin of PRC1 complex & original...	0.01	OrthoFinder output from all 47 species
Zm00001e028587_P002	AL4, Zm00001e028587	Alfin-like transcription factor	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0042393	histone binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	HCCA
CC	GO:0005634	nucleus	IEP	HCCA
CC	GO:0043227	membrane-bounded organelle	IEP	HCCA
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	HCCA
MF	GO:0046983	protein dimerization activity	IEP	HCCA
MF	GO:0140110	transcription regulator activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR019787	Znf_PHD-finger	193	241
IPR021998	Alfin_N	11	138

External Links

No external refs found!

Solyc07g041190.3.1 (AL5, Solyc07g041190)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation