1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc07g017870.2.1

Solyc07g017870.2.1 (Solyc07g017870)


Aliases : Solyc07g017870

Description : no hits & (original description: none)


Gene families : OG0001399 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001399_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g017870.2.1
Cluster HCCA: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
Dac_g06940 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01000145001 No alias No description available 0.07 OrthoFinder output from all 47 species
Gb_29019 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_33289 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os03g32790.1 LOC_Os03g32790 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os03g40770.1 LOC_Os03g40770 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os03g55400.1 LOC_Os03g55400 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s1111.g027946 No alias not classified & original description: CDS=30-3113 0.02 OrthoFinder output from all 47 species
Smo413433 No alias No description available 0.02 OrthoFinder output from all 47 species
Zm00001e002075_P002 Zm00001e002075 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e013117_P001 Zm00001e013117 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e030266_P001 Zm00001e030266 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004097 catechol oxidase activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016849 phosphorus-oxygen lyase activity IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
MF GO:0033897 ribonuclease T2 activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA

No InterPro domains available for this sequence

No external refs found!