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  5. Solyc07g008450.3.1

Solyc07g008450.3.1 (Solyc07g008450)


Aliases : Solyc07g008450

Description : no hits & (original description: none)


Gene families : OG0004061 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004061_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g008450.3.1
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
AT4G38120 No alias ARM repeat superfamily protein 0.07 OrthoFinder output from all 47 species
Ala_g07595 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g09425 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g34182 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0006.g009907 No alias not classified & original description: CDS=118-3663 0.02 OrthoFinder output from all 47 species
Cre03.g166600 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01019707001 No alias No description available 0.04 OrthoFinder output from all 47 species
Lfl_g10326 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Mp1g07480.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Pir_g61732 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g23289 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e040248_P002 Zm00001e040248 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR025283 DUF4042 269 451
No external refs found!