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  5. Solyc07g007160.3.1

Solyc07g007160.3.1 (Solyc07g007160)


Aliases : Solyc07g007160

Description : no hits & (original description: none)


Gene families : OG0000957 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000957_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Solyc07g007160.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272380 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
AMTR_s00026p00191500 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.05 OrthoFinder output from all 47 species
AT2G15580 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
Dcu_g23290 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10274793g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g01938 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g15303 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g107290.3.1 Solyc01g107290 Probable E3 ubiquitin-protein ligase RHY1A... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 145 188
No external refs found!