Solyc07g006870.4.1 (XTR3, XTH25, Solyc07g006870)

Aliases : XTR3, XTH25, Solyc07g006870

Description : Probable xyloglucan endotransglucosylase/hydrolase protein 25 OS=Arabidopsis thaliana (sp|q38907|xth25_arath : 383.0) & Enzyme classification.EC_2 transferases.EC_2.4 glycosyltransferase(50.2.4 : 323.7)

Gene families : OG0000079 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000079_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc07g006870.4.1
Cluster	HCCA: Cluster_107

Target	Alias	Description	ECC score	Gene Family Method
AT5G57550	XTR3, XTH25	xyloglucan endotransglucosylase/hydrolase 25	0.04	OrthoFinder output from all 47 species
Adi_g017857	XTH8	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g019777	XTH16	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene16091.t1	XTH6, Aspi01Gene16091	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g48122	XTH9	xyloglucan/beta-glucan hydrolase *(EG16) & original...	0.02	OrthoFinder output from all 47 species
GSVIVT01012635001	XTH8	Probable xyloglucan endotransglucosylase/hydrolase...	0.05	OrthoFinder output from all 47 species
GSVIVT01029165001	XTR6, XTH23	Probable xyloglucan endotransglucosylase/hydrolase...	0.03	OrthoFinder output from all 47 species
GSVIVT01029170001	TCH4, XTH22	Probable xyloglucan endotransglucosylase/hydrolase...	0.03	OrthoFinder output from all 47 species
GSVIVT01029173001	XTR6, XTH23	Probable xyloglucan endotransglucosylase/hydrolase...	0.03	OrthoFinder output from all 47 species
Gb_04597	XTH9	Xyloglucan endotransglucosylase/hydrolase protein 9...	0.04	OrthoFinder output from all 47 species
Gb_21649	XTH10	Probable xyloglucan endotransglucosylase/hydrolase...	0.03	OrthoFinder output from all 47 species
Lfl_g06408	XTR7, XTH15	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
MA_10434153g0020	XTH5, EXGT-A4	Probable xyloglucan endotransglucosylase/hydrolase...	0.02	OrthoFinder output from all 47 species
MA_148g0010	XTH9	Xyloglucan endotransglucosylase/hydrolase protein 9...	0.06	OrthoFinder output from all 47 species
MA_476450g0010	XTH6	Probable xyloglucan endotransglucosylase/hydrolase...	0.02	OrthoFinder output from all 47 species
MA_682426g0010	XTH5, EXGT-A4	Probable xyloglucan endotransglucosylase/hydrolase...	0.02	OrthoFinder output from all 47 species
MA_7132g0010	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
MA_781557g0010	XTH5, EXGT-A4	Enzyme classification.EC_2 transferases.EC_2.4...	0.03	OrthoFinder output from all 47 species
Mp2g17780.1	XTH7	Probable xyloglucan endotransglucosylase/hydrolase...	0.02	OrthoFinder output from all 47 species
Mp2g21490.1	XTH7	Enzyme classification.EC_2 transferases.EC_2.4...	0.04	OrthoFinder output from all 47 species
Mp4g10000.1	XTH5, EXGT-A4	Enzyme classification.EC_2 transferases.EC_2.4...	0.03	OrthoFinder output from all 47 species
Ore_g00992	XTR7, XTH15	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g03078	XTH16	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g29835	XTR7, XTH15	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g01794	XTR7, XTH15	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g18401	No alias	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g19646	XTH8	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e024202_P001	XTH5, EXGT-A4,...	Probable xyloglucan endotransglucosylase/hydrolase...	0.04	OrthoFinder output from all 47 species
Zm00001e040081_P001	TCH4, XTH22,...	Xyloglucan endotransglycosylase/hydrolase protein 8...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	None	Extended
CC	GO:0005618	cell wall	IEA	Interproscan
BP	GO:0005975	carbohydrate metabolic process	IEA	Interproscan
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	glycosyltransferase activity	None	Extended
MF	GO:0016758	hexosyltransferase activity	None	Extended
MF	GO:0016762	xyloglucan:xyloglucosyl transferase activity	IEA	Interproscan
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
CC	GO:0030312	external encapsulating structure	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
MF	GO:0046527	glucosyltransferase activity	None	Extended
CC	GO:0048046	apoplast	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006351	DNA-templated transcription	IEP	HCCA
BP	GO:0032774	RNA biosynthetic process	IEP	HCCA
MF	GO:0051536	iron-sulfur cluster binding	IEP	HCCA
MF	GO:0051540	metal cluster binding	IEP	HCCA
BP	GO:0097659	nucleic acid-templated transcription	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR010713	XET_C	238	279
IPR000757	GH16	32	211

External Links

No external refs found!

Solyc07g006870.4.1 (XTR3, XTH25, Solyc07g006870)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation