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  5. Solyc07g005450.3.1

Solyc07g005450.3.1 (CPL4, Solyc07g005450)


Aliases : CPL4, Solyc07g005450

Description : RNA polymerase-II phosphatase. subcluster H/CPL3-4 phosphatase


Gene families : OG0001184 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001184_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc07g005450.3.1

Target Alias Description ECC score Gene Family Method Actions
AT5G58003 CPL4 C-terminal domain phosphatase-like 4 0.03 OrthoFinder output from all 47 species
Als_g13479 CPL4 subcluster H/CPL3-4 phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g31997 ATCPL3, CPL3 subcluster H/CPL3-4 phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g09003 ATCPL3, CPL3 subcluster H/CPL3-4 phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g10325 ATCPL3, CPL3 subcluster H/CPL3-4 phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Gb_15284 ATCPL3, CPL3 subcluster H/CPL3-4 phosphatase 0.03 OrthoFinder output from all 47 species
Ore_g28869 ATCPL3, CPL3 subcluster H/CPL3-4 phosphatase & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g12169 ATCPL3, CPL3 subcluster H/CPL3-4 phosphatase & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
CC GO:0005956 protein kinase CK2 complex IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0019207 kinase regulator activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019887 protein kinase regulator activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1902554 serine/threonine protein kinase complex IEP HCCA
CC GO:1902911 protein kinase complex IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004274 FCP1_dom 163 310
IPR001357 BRCT_dom 377 450
No external refs found!