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  5. Solyc06g084240.2.1

Solyc06g084240.2.1 (CPS, ATCPS1, ABC33,...)


Aliases : CPS, ATCPS1, ABC33, CPS1, GA1, Solyc06g084240

Description : ent-copalyl diphosphate synthase


Gene families : OG0000661 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000661_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g084240.2.1
Cluster HCCA: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
AT1G79460 KS, KS1, ATKS1, ATKS, GA2 Terpenoid cyclases/Protein prenyltransferases superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g024705 CPS, ATCPS1,... EC_5.5 intramolecular lyase & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g057757 CPS, ATCPS1,... EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g083446 CPS, ATCPS1,... EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g083447 CPS, ATCPS1,... EC_5.5 intramolecular lyase & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g10734 KS, KS1, ATKS1, ATKS, GA2 EC_5.5 intramolecular lyase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01001155001 CPS, ATCPS1,... Phytohormones.gibberellin.synthesis.ent-copalyl... 0.04 OrthoFinder output from all 47 species
Gb_04666 CPS, ATCPS1,... ent-copalyl diphosphate synthase 0.05 OrthoFinder output from all 47 species
Gb_38696 TPS02 mono-/sesquiterpene-/diterpene synthase 0.03 OrthoFinder output from all 47 species
MA_10433916g0010 CPS, ATCPS1,... mono-/sesquiterpene-/diterpene synthase 0.03 OrthoFinder output from all 47 species
Mp6g05430.1 TPS04, TPS4, GES Bifunctional levopimaradiene synthase, chloroplastic... 0.02 OrthoFinder output from all 47 species
Nbi_g22166 CPS, ATCPS1,... EC_5.5 intramolecular lyase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g14979 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g20199 CPS, ATCPS1,... EC_5.5 intramolecular lyase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g29991 CPS, ATCPS1,... EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g29992 CPS, ATCPS1,... EC_5.5 intramolecular lyase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g31528 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g33487 CPS, ATCPS1,... EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g35982 CPS, ATCPS1,... EC_5.5 intramolecular lyase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g37904 CPS, ATCPS1,... EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g38612 KS, KS1, ATKS1, ATKS, GA2 EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g38613 KS, KS1, ATKS1, ATKS, GA2 EC_4.2 carbon-oxygen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g25469 CPS, ATCPS1,... EC_5.5 intramolecular lyase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g59339 CPS, ATCPS1,... EC_5.5 intramolecular lyase & original description: none 0.02 OrthoFinder output from all 47 species
Smo124329 CPS, ATCPS1,... Phytohormones.gibberellin.synthesis.ent-copalyl... 0.04 OrthoFinder output from all 47 species
Smo163980 CPS, ATCPS1,... Phytohormones.gibberellin.synthesis.ent-kaurene synthase 0.05 OrthoFinder output from all 47 species
Smo403763 No alias No description available 0.02 OrthoFinder output from all 47 species
Smo403764 KS, KS1, ATKS1, ATKS, GA2 Secondary metabolism.terpenoids.terpenoid... 0.02 OrthoFinder output from all 47 species
Tin_g30543 CPS, ATCPS1,... EC_5.5 intramolecular lyase & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e040179_P001 KS, KS1, ATKS1,... ent-kaurene synthase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA Interproscan
MF GO:0010333 terpene synthase activity IEA Interproscan
MF GO:0016829 lyase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
InterPro domains Description Start Stop
IPR001906 Terpene_synth_N 273 479
IPR005630 Terpene_synthase_metal-bd 523 600
No external refs found!