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  5. Solyc06g083730.3.1

Solyc06g083730.3.1 (Solyc06g083730)


Aliases : Solyc06g083730

Description : mRNA endoribonuclease (G3BP)


Gene families : OG0000432 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000432_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g083730.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00254870 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AMTR_s00039p00228400 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AT5G60980 No alias Nuclear transport factor 2 (NTF2) family protein with... 0.1 OrthoFinder output from all 47 species
Adi_g036227 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g082579 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g25747 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g02233 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.06 OrthoFinder output from all 47 species
Als_g50035 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene37261.t1 Aspi01Gene37261 mRNA endoribonuclease *(G3BP) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0051.g031282 No alias mRNA endoribonuclease *(G3BP) & original description: CDS=1-1857 0.05 OrthoFinder output from all 47 species
Cba_g29673 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.31G028700.1 Ceric.31G028700 mRNA endoribonuclease *(G3BP) & original description:... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000829.14 No alias No description available 0.02 OrthoFinder output from all 47 species
Dac_g28549 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01003923001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os04g30430.1 LOC_Os04g30430 mRNA endoribonuclease (G3BP) 0.04 OrthoFinder output from all 47 species
Len_g01806 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10429469g0010 No alias mRNA endoribonuclease (G3BP) 0.03 OrthoFinder output from all 47 species
MA_4039171g0010 No alias mRNA endoribonuclease (G3BP) 0.03 OrthoFinder output from all 47 species
Msp_g07609 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g12498 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g35838 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g09583 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g06094 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g20465 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g05993 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e014590_P001 Zm00001e014590 mRNA endoribonuclease (G3BP) 0.03 OrthoFinder output from all 47 species
Zm00001e022613_P001 Zm00001e022613 mRNA endoribonuclease (G3BP) 0.06 OrthoFinder output from all 47 species
Zm00001e040697_P001 Zm00001e040697 mRNA endoribonuclease (G3BP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004470 malic enzyme activity IEP HCCA
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016615 malate dehydrogenase activity IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030119 AP-type membrane coat adaptor complex IEP HCCA
CC GO:0030131 clathrin adaptor complex IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR002075 NTF2_dom 15 128
IPR000504 RRM_dom 336 394
No external refs found!