Solyc06g083270.3.1 (Solyc06g083270)

Aliases : Solyc06g083270

Description : ER lumen protein-retaining receptor B OS=Arabidopsis thaliana (sp|q8vwi1|erd2b_arath : 92.0)

Gene families : OG0001532 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001532_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc06g083270.3.1
Cluster	HCCA: Cluster_132

Target	Alias	Description	ECC score	Gene Family Method
Aop_g02463	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Azfi_s0280.g062315	No alias	not classified & original description: CDS=330-1160	0.04	OrthoFinder output from all 47 species
Ceric.22G058500.1	Ceric.22G058500	not classified & original description: pacid=50614797...	0.05	OrthoFinder output from all 47 species
Ceric.34G011800.1	Ceric.34G011800	not classified & original description: pacid=50623354...	0.03	OrthoFinder output from all 47 species
Dcu_g05401	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Len_g35172	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g02994	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Smo115638	No alias	ER lumen protein-retaining receptor B OS=Arabidopsis thaliana	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005048	signal sequence binding	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006621	protein retention in ER lumen	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0032507	maintenance of protein location in cell	None	Extended
MF	GO:0033218	amide binding	None	Extended
BP	GO:0035437	maintenance of protein localization in endoplasmic reticulum	None	Extended
MF	GO:0042277	peptide binding	None	Extended
BP	GO:0045185	maintenance of protein location	None	Extended
MF	GO:0046923	ER retention sequence binding	IEA	Interproscan
BP	GO:0051179	localization	None	Extended
BP	GO:0051235	maintenance of location	None	Extended
BP	GO:0051651	maintenance of location in cell	None	Extended
BP	GO:0072595	maintenance of protein localization in organelle	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004175	endopeptidase activity	IEP	HCCA
MF	GO:0004190	aspartic-type endopeptidase activity	IEP	HCCA
CC	GO:0005783	endoplasmic reticulum	IEP	HCCA
BP	GO:0006457	protein folding	IEP	HCCA
MF	GO:0008233	peptidase activity	IEP	HCCA
BP	GO:0032446	protein modification by small protein conjugation	IEP	HCCA
MF	GO:0051082	unfolded protein binding	IEP	HCCA
MF	GO:0070001	aspartic-type peptidase activity	IEP	HCCA
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	HCCA
BP	GO:0071569	protein ufmylation	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000133	ER_ret_rcpt	74	216

External Links

No external refs found!