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Aliases : Solyc06g082840
Description : clathrin uncoating protein (AUL)
Gene families : OG0000516 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000516_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc06g082840.4.1 | |
| Cluster | HCCA: Cluster_105 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G21660 | No alias | Chaperone DnaJ-domain superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
| AT4G36520 | No alias | Chaperone DnaJ-domain superfamily protein | 0.07 | OrthoFinder output from all 47 species | |
| Adi_g007785 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g055215 | No alias | clathrin uncoating protein *(AUL) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g18891 | No alias | clathrin uncoating protein *(AUL) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g46222 | No alias | clathrin uncoating protein *(AUL) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g27951 | No alias | clathrin uncoating protein *(AUL) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g11003 | No alias | clathrin uncoating protein *(AUL) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g03944 | No alias | clathrin uncoating protein *(AUL) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g10008 | No alias | clathrin uncoating protein *(AUL) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g10033 | No alias | clathrin uncoating protein *(AUL) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01022322001 | No alias | Vesicle trafficking.clathrin coated vesicle (CCV)... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g44310.1 | LOC_Os01g44310 | clathrin uncoating protein (AUL) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os05g50370.1 | LOC_Os05g50370 | clathrin uncoating protein (AUL) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os12g36180.1 | LOC_Os12g36180 | clathrin uncoating protein (AUL) | 0.08 | OrthoFinder output from all 47 species | |
| MA_10432277g0010 | No alias | clathrin uncoating protein (AUL) | 0.04 | OrthoFinder output from all 47 species | |
| MA_21753g0010 | No alias | clathrin uncoating protein (AUL) | 0.03 | OrthoFinder output from all 47 species | |
| Mp3g09960.1 | No alias | clathrin uncoating protein (AUL) | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g09447 | No alias | clathrin uncoating protein *(AUL) & original description: none | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005634 | nucleus | IEP | HCCA |
| BP | GO:0006352 | DNA-templated transcription initiation | IEP | HCCA |
| BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | HCCA |
| BP | GO:0006367 | transcription initiation at RNA polymerase II promoter | IEP | HCCA |
| BP | GO:0009891 | positive regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0009893 | positive regulation of metabolic process | IEP | HCCA |
| BP | GO:0010557 | positive regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0010604 | positive regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0031325 | positive regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031328 | positive regulation of cellular biosynthetic process | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| BP | GO:0032784 | regulation of DNA-templated transcription elongation | IEP | HCCA |
| BP | GO:0032786 | positive regulation of DNA-templated transcription, elongation | IEP | HCCA |
| BP | GO:0032968 | positive regulation of transcription elongation by RNA polymerase II | IEP | HCCA |
| BP | GO:0034243 | regulation of transcription elongation by RNA polymerase II | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
| BP | GO:0045893 | positive regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0045935 | positive regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0045944 | positive regulation of transcription by RNA polymerase II | IEP | HCCA |
| BP | GO:0048518 | positive regulation of biological process | IEP | HCCA |
| BP | GO:0048522 | positive regulation of cellular process | IEP | HCCA |
| BP | GO:0051173 | positive regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051254 | positive regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:1902680 | positive regulation of RNA biosynthetic process | IEP | HCCA |
| BP | GO:1903508 | positive regulation of nucleic acid-templated transcription | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |