Solyc06g075340.4.1 (CARB, Solyc06g075340)

Aliases : CARB, Solyc06g075340

Description : large subunit of carbamoyl phosphate synthetase heterodimer. large subunit of carbamoyl phosphate synthetase heterodimer

Gene families : OG0004410 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004410_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc06g075340.4.1
Cluster	HCCA: Cluster_8

Target	Alias	Description	ECC score	Gene Family Method
AT1G29900	CARB	carbamoyl phosphate synthetase B	0.06	OrthoFinder output from all 47 species
Als_g39625	CARB	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0074.g037310	CARB	EC_6.3 ligase forming carbon-nitrogen bond & original...	0.03	OrthoFinder output from all 47 species
Dcu_g07166	CARB	EC_6.3 ligase forming carbon-nitrogen bond & original...	0.04	OrthoFinder output from all 47 species
LOC_Os01g38970.1	CARB, LOC_Os01g38970	large subunit of carbamoyl phosphate synthetase...	0.04	OrthoFinder output from all 47 species
MA_10329277g0010	CARB	Carbamoyl-phosphate synthase large chain, chloroplastic...	0.04	OrthoFinder output from all 47 species
Mp4g19600.1	CARB	large subunit of carbamoyl phosphate synthetase...	0.02	OrthoFinder output from all 47 species
Pp3c2_19430V3.1	CARB, Pp3c2_19430	carbamoyl phosphate synthetase B	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004637	phosphoribosylamine-glycine ligase activity	IEP	HCCA
BP	GO:0006144	purine nucleobase metabolic process	IEP	HCCA
BP	GO:0009112	nucleobase metabolic process	IEP	HCCA
BP	GO:0009113	purine nucleobase biosynthetic process	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	HCCA
BP	GO:0018130	heterocycle biosynthetic process	IEP	HCCA
BP	GO:0019438	aromatic compound biosynthetic process	IEP	HCCA
CC	GO:0019867	outer membrane	IEP	HCCA
BP	GO:0046112	nucleobase biosynthetic process	IEP	HCCA
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	HCCA
BP	GO:0072521	purine-containing compound metabolic process	IEP	HCCA
BP	GO:0072522	purine-containing compound biosynthetic process	IEP	HCCA
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR011607	MGS-like_dom	1063	1148
IPR005479	CbamoylP_synth_lsu-like_ATP-bd	219	426
IPR005479	CbamoylP_synth_lsu-like_ATP-bd	777	979
IPR005480	CarbamoylP_synth_lsu_oligo	519	638

External Links

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