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Aliases : WIP3, Solyc06g074360
Description : C2H2 zinc finger transcription factor
Gene families : OG0001814 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001814_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc06g074360.4.1 | |
| Cluster | HCCA: Cluster_65 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00114p00100630 | WIP3,... | Zinc finger protein WIP3 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| AT1G08290 | WIP3 | WIP domain protein 3 | 0.06 | OrthoFinder output from all 47 species | |
| AT1G13290 | WIP6, DOT5 | C2H2-like zinc finger protein | 0.03 | OrthoFinder output from all 47 species | |
| AT1G51220 | WIP5 | WIP domain protein 5 | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g05354 | WIP2, NTT | C2H2 subclass WIP transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g27587 | WIP2, NTT | C2H2 subclass WIP transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene04309.t1 | WIP2, NTT,... | C2H2 subclass WIP transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0011.g012566 | WIP5 | C2H2 subclass WIP transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.11G037100.1 | WIP5, Ceric.11G037100 | C2H2 subclass WIP transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.24G008900.1 | WIP2, NTT,... | C2H2 subclass WIP transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g06979 | WIP2, NTT | C2H2 subclass WIP transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01009046001 | TT1, WIP1 | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.07 | OrthoFinder output from all 47 species | |
| GSVIVT01032076001 | WIP2, NTT | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01033329001 | WIP2, NTT | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os05g37190.1 | WIP5, LOC_Os05g37190 | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g40960.1 | WIP2, NTT, LOC_Os06g40960 | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os08g39390.1 | WIP2, NTT, LOC_Os08g39390 | C2H2 zinc finger transcription factor | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os09g10980.1 | WIP5, LOC_Os09g10980 | C2H2 zinc finger transcription factor | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os09g13680.1 | WIP6, DOT5,... | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os09g31140.1 | WIP2, NTT, LOC_Os09g31140 | C2H2 zinc finger transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g15647 | WIP2, NTT | C2H2 subclass WIP transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| MA_3555g0010 | WIP6, DOT5 | C2H2 zinc finger transcription factor | 0.05 | OrthoFinder output from all 47 species | |
| Pir_g38869 | WIP3 | C2H2 subclass WIP transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g12905 | WIP2, NTT | C2H2 subclass WIP transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0034.g011251 | WIP2, NTT | C2H2 subclass WIP transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Smo36987 | WIP2, NTT | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc11g062060.3.1 | WIP2, NTT, Solyc11g062060 | C2H2 zinc finger transcription factor | 0.01 | OrthoFinder output from all 47 species | |
| Spa_g55124 | WIP2, NTT | C2H2 subclass WIP transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g57335 | WIP5 | C2H2 subclass WIP transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g31555 | WIP2, NTT | C2H2 subclass WIP transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e009663_P001 | WIP6, DOT5,... | C2H2 zinc finger transcription factor | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e024373_P001 | WIP2, NTT, Zm00001e024373 | C2H2 zinc finger transcription factor | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e026959_P001 | WIP5, Zm00001e026959 | C2H2 zinc finger transcription factor | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004568 | chitinase activity | IEP | HCCA |
| BP | GO:0006022 | aminoglycan metabolic process | IEP | HCCA |
| BP | GO:0006026 | aminoglycan catabolic process | IEP | HCCA |
| BP | GO:0006030 | chitin metabolic process | IEP | HCCA |
| BP | GO:0006032 | chitin catabolic process | IEP | HCCA |
| BP | GO:0006040 | amino sugar metabolic process | IEP | HCCA |
| BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
| MF | GO:0015267 | channel activity | IEP | HCCA |
| BP | GO:0016998 | cell wall macromolecule catabolic process | IEP | HCCA |
| MF | GO:0022803 | passive transmembrane transporter activity | IEP | HCCA |
| BP | GO:0044036 | cell wall macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
| BP | GO:0046348 | amino sugar catabolic process | IEP | HCCA |
| BP | GO:1901071 | glucosamine-containing compound metabolic process | IEP | HCCA |
| BP | GO:1901072 | glucosamine-containing compound catabolic process | IEP | HCCA |
| BP | GO:1901136 | carbohydrate derivative catabolic process | IEP | HCCA |
| BP | GO:1901565 | organonitrogen compound catabolic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |