Solyc06g074310.4.1 (Solyc06g074310)


Aliases : Solyc06g074310

Description : Transmembrane 9 superfamily member 5 OS=Arabidopsis thaliana (sp|f4hw17|tmn5_arath : 578.0)


Gene families : OG0000505 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000505_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g074310.4.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00146310 evm_27.TU.AmTr_v1... Transmembrane 9 superfamily member 2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT1G10950 TMN1, AtTMN1 transmembrane nine 1 0.03 OrthoFinder output from all 47 species
AT1G14670 No alias Endomembrane protein 70 protein family 0.03 OrthoFinder output from all 47 species
AT2G01970 No alias Endomembrane protein 70 protein family 0.05 OrthoFinder output from all 47 species
AT5G37310 No alias Endomembrane protein 70 protein family 0.04 OrthoFinder output from all 47 species
Adi_g002017 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g003344 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g041686 TMN1, AtTMN1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g079623 TMN1, AtTMN1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g06723 TMN1, AtTMN1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g03157 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g05218 TMN1, AtTMN1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g32517 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g27302 TMN1, AtTMN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g03467 TMN1, AtTMN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03823 TMN1, AtTMN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0509.g074704 TMN1, AtTMN1 not classified & original description: CDS=1-1740 0.04 OrthoFinder output from all 47 species
Ceric.22G054000.1 Ceric.22G054000 not classified & original description: pacid=50613875... 0.05 OrthoFinder output from all 47 species
Ceric.26G022100.1 TMN1, AtTMN1,... not classified & original description: pacid=50599543... 0.04 OrthoFinder output from all 47 species
Ceric.34G054800.1 TMN1, AtTMN1,... not classified & original description: pacid=50624162... 0.07 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020780.24 No alias Transmembrane 9 superfamily member 2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cre01.g024350 No alias Transmembrane 9 superfamily member 2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dcu_g10047 TMN1, AtTMN1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g10048 TMN1, AtTMN1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g36626 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g31825 TMN1, AtTMN1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g24030 TMN1, AtTMN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g31713 TMN1, AtTMN1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01023343001 TMN1, AtTMN1 Transmembrane 9 superfamily member 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01026057001 TMN1, AtTMN1 Transmembrane 9 superfamily member 1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01036130001 No alias Transmembrane 9 superfamily member 5 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
Gb_02686 No alias Transmembrane 9 superfamily member 3 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Gb_07212 TMN1, AtTMN1 Transmembrane 9 superfamily member 1 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Gb_13844 TMN1, AtTMN1 Transmembrane 9 superfamily member 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os02g34690.1 TMN1, AtTMN1,... Transmembrane 9 superfamily member 1 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
LOC_Os08g06470.1 LOC_Os08g06470 Transmembrane 9 superfamily member 4 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
LOC_Os08g44150.1 LOC_Os08g44150 Transmembrane 9 superfamily member 10 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os11g07910.1 TMN1, AtTMN1,... Transmembrane 9 superfamily member 1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os12g07670.1 TMN1, AtTMN1,... Transmembrane 9 superfamily member 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Len_g07740 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g19351 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g40854 TMN1, AtTMN1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g38915 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10430999g0010 No alias Transmembrane 9 superfamily member 2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_10431134g0010 TMN1, AtTMN1 Transmembrane 9 superfamily member 1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_481029g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp3g06160.1 No alias Transmembrane 9 superfamily member 2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Nbi_g02238 TMN1, AtTMN1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g06247 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g06736 TMN1, AtTMN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g08253 TMN1, AtTMN1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g13358 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g12963 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13530 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g45907 TMN1, AtTMN1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06433 TMN1, AtTMN1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g10846 TMN1, AtTMN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22300 TMN1, AtTMN1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g47696 TMN1, AtTMN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06605 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14792 TMN1, AtTMN1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e008994_P001 TMN1, AtTMN1,... Transmembrane 9 superfamily member 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e039502_P001 TMN1, AtTMN1,... Transmembrane 9 superfamily member 1 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
CC GO:0008303 caspase complex IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016229 steroid dehydrogenase activity IEP HCCA
BP GO:0016255 attachment of GPI anchor to protein IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
CC GO:0042765 GPI-anchor transamidase complex IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR004240 EMP70 53 544
No external refs found!