Solyc06g070950.2.1 (ATATH6, ATH6, Solyc06g070950)

Aliases : ATATH6, ATH6, Solyc06g070950

Description : subfamily ABCA transporter

Gene families : OG0001879 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001879_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc06g070950.2.1
Cluster	HCCA: Cluster_84

Target	Alias	Description	ECC score	Gene Family Method
AT3G47790	ATH7, ATATH7	ABC2 homolog 7	0.03	OrthoFinder output from all 47 species
AT5G61740	ATATH14, ATH14	ABC2 homolog 14	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000057.67	ATATH4, ABCA5, ATH4	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
Cre14.g618400	ATH7, ATATH7	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
Cre17.g721000	ATH7, ATATH7	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
Msp_g11278	ATATH6, ATH6	subfamily ABCA transporter & original description: none	0.03	OrthoFinder output from all 47 species
Smo171117	ATATH6, ATH6	Solute transport.primary active transport.ABC...	0.04	OrthoFinder output from all 47 species
Smo268954	ATATH6, ATH6	Solute transport.primary active transport.ABC...	0.04	OrthoFinder output from all 47 species
Solyc03g113040.4.1	ATATH6, ATH6,...	subfamily ABCA transporter	0.05	OrthoFinder output from all 47 species
Tin_g31576	ATATH6, ATH6	subfamily ABCA transporter & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e014489_P004	ATATH14, ATH14,...	subfamily ABCA transporter	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005507	copper ion binding	IEP	HCCA
MF	GO:0015291	secondary active transmembrane transporter activity	IEP	HCCA
MF	GO:0015297	antiporter activity	IEP	HCCA
BP	GO:0016043	cellular component organization	IEP	HCCA
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	HCCA
MF	GO:0030599	pectinesterase activity	IEP	HCCA
BP	GO:0042545	cell wall modification	IEP	HCCA
MF	GO:0042910	xenobiotic transmembrane transporter activity	IEP	HCCA
BP	GO:0045229	external encapsulating structure organization	IEP	HCCA
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	HCCA
BP	GO:0071554	cell wall organization or biogenesis	IEP	HCCA
BP	GO:0071555	cell wall organization	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	594	738

External Links

No external refs found!