Aliases : ATATH6, ATH6, Solyc06g070950
Description : subfamily ABCA transporter
Gene families : OG0001879 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001879_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Solyc06g070950.2.1 | |
Cluster | HCCA: Cluster_84 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT3G47790 | ATH7, ATATH7 | ABC2 homolog 7 | 0.03 | OrthoFinder output from all 47 species | |
AT5G61740 | ATATH14, ATH14 | ABC2 homolog 14 | 0.03 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000057.67 | ATATH4, ABCA5, ATH4 | Solute transport.primary active transport.ABC... | 0.02 | OrthoFinder output from all 47 species | |
Cre14.g618400 | ATH7, ATATH7 | Solute transport.primary active transport.ABC... | 0.02 | OrthoFinder output from all 47 species | |
Cre17.g721000 | ATH7, ATATH7 | Solute transport.primary active transport.ABC... | 0.02 | OrthoFinder output from all 47 species | |
Msp_g11278 | ATATH6, ATH6 | subfamily ABCA transporter & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Smo171117 | ATATH6, ATH6 | Solute transport.primary active transport.ABC... | 0.04 | OrthoFinder output from all 47 species | |
Smo268954 | ATATH6, ATH6 | Solute transport.primary active transport.ABC... | 0.04 | OrthoFinder output from all 47 species | |
Solyc03g113040.4.1 | ATATH6, ATH6,... | subfamily ABCA transporter | 0.05 | OrthoFinder output from all 47 species | |
Tin_g31576 | ATATH6, ATH6 | subfamily ABCA transporter & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e014489_P004 | ATATH14, ATH14,... | subfamily ABCA transporter | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005524 | ATP binding | IEA | Interproscan |
MF | GO:0016887 | ATP hydrolysis activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005507 | copper ion binding | IEP | HCCA |
MF | GO:0015291 | secondary active transmembrane transporter activity | IEP | HCCA |
MF | GO:0015297 | antiporter activity | IEP | HCCA |
BP | GO:0016043 | cellular component organization | IEP | HCCA |
MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | HCCA |
MF | GO:0030599 | pectinesterase activity | IEP | HCCA |
BP | GO:0042545 | cell wall modification | IEP | HCCA |
MF | GO:0042910 | xenobiotic transmembrane transporter activity | IEP | HCCA |
BP | GO:0045229 | external encapsulating structure organization | IEP | HCCA |
MF | GO:0052689 | carboxylic ester hydrolase activity | IEP | HCCA |
BP | GO:0071554 | cell wall organization or biogenesis | IEP | HCCA |
BP | GO:0071555 | cell wall organization | IEP | HCCA |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR003439 | ABC_transporter-like_ATP-bd | 594 | 738 |
No external refs found! |