Solyc06g069770.3.1 (Solyc06g069770)


Aliases : Solyc06g069770

Description : Protein EMBRYO DEFECTIVE 514 OS=Arabidopsis thaliana (sp|q8l557|em514_arath : 155.0)


Gene families : OG0001145 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001145_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g069770.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00189420 evm_27.TU.AmTr_v1... Protein EMBRYO DEFECTIVE 514 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AT5G62440 No alias Protein of unknown function (DUF3223) 0.04 OrthoFinder output from all 47 species
Adi_g008133 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g02261 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g07970 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g36464 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.24G080300.1 Ceric.24G080300 not classified & original description: pacid=50628596... 0.05 OrthoFinder output from all 47 species
Cre02.g085950 No alias No description available 0.02 OrthoFinder output from all 47 species
Ehy_g00538 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g09830 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os09g02440.1 LOC_Os09g02440 Protein DCL homolog, chloroplastic OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Len_g13778 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g19534 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_77759g0010 No alias Protein EMBRYO DEFECTIVE 514 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp1g29710.1 No alias Protein EMBRYO DEFECTIVE 514 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0116.g021045 No alias not classified & original description: CDS=1-735 0.03 OrthoFinder output from all 47 species
Zm00001e000643_P001 Zm00001e000643 Protein EMBRYO DEFECTIVE 514 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Zm00001e038843_P001 Zm00001e038843 Protein EMBRYO DEFECTIVE 514 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!