- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : Solyc06g069440
Description : Zinc finger CCCH domain-containing protein 38 OS=Arabidopsis thaliana (sp|q9lih5|c3h38_arath : 96.3)
Gene families : OG0000859 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000859_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00154p00086540 | evm_27.TU.AmTr_v1... | Zinc finger CCCH domain-containing protein 38... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g020080 | No alias | component *(FES1) of FRI-C transcription effector... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g086845 | No alias | component *(FES1) of FRI-C transcription effector... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g113323 | No alias | component *(FES1) of FRI-C transcription effector... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g14556 | No alias | component *(FES1) of FRI-C transcription effector... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g05138 | No alias | component *(FES1) of FRI-C transcription effector... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g22679 | No alias | component *(FES1) of FRI-C transcription effector... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g08771 | No alias | component *(FES1) of FRI-C transcription effector... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g31626 | No alias | component *(FES1) of FRI-C transcription effector... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g23169 | No alias | component *(FES1) of FRI-C transcription effector... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.09G003600.1 | Ceric.09G003600 | component *(FES1) of FRI-C transcription effector... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.20G066500.1 | Ceric.20G066500 | component *(FES1) of FRI-C transcription effector... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.20G084000.1 | Ceric.20G084000 | component *(FES1) of FRI-C transcription effector... | 0.06 | OrthoFinder output from all 47 species | |
| Dac_g06929 | No alias | component *(FES1) of FRI-C transcription effector... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g07178 | No alias | component *(FES1) of FRI-C transcription effector... | 0.06 | OrthoFinder output from all 47 species | |
| Dde_g10766 | No alias | component *(FES1) of FRI-C transcription effector... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g18865 | No alias | component *(FES1) of FRI-C transcription effector... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01010035001 | ACCD | RNA biosynthesis.transcriptional activation.C3H zinc... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_00875 | No alias | C3H zinc finger transcription factor | 0.05 | OrthoFinder output from all 47 species | |
| Gb_19122 | No alias | C3H zinc finger transcription factor | 0.06 | OrthoFinder output from all 47 species | |
| Gb_26302 | No alias | C3H zinc finger transcription factor | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os03g11580.1 | LOC_Os03g11580 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os05g41790.1 | LOC_Os05g41790 | C3H zinc finger transcription factor | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os08g04170.1 | LOC_Os08g04170 | C3H zinc finger transcription factor | 0.06 | OrthoFinder output from all 47 species | |
| Len_g22996 | No alias | component *(FES1) of FRI-C transcription effector... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g31683 | No alias | component *(FES1) of FRI-C transcription effector... | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g05738 | No alias | component *(FES1) of FRI-C transcription effector... | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g29094 | No alias | component *(FES1) of FRI-C transcription effector... | 0.04 | OrthoFinder output from all 47 species | |
| MA_111475g0010 | No alias | Zinc finger CCCH domain-containing protein 55 OS=Oryza... | 0.04 | OrthoFinder output from all 47 species | |
| MA_111475g0020 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| MA_321233g0010 | No alias | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| MA_8408g0030 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Mp1g05400.1 | No alias | Zinc finger CCCH domain-containing protein 55 OS=Oryza... | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g19470 | No alias | component *(FES1) of FRI-C transcription effector... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g04479 | No alias | component *(FES1) of FRI-C transcription effector... | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g33981 | No alias | component *(FES1) of FRI-C transcription effector... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g08246 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g30501 | No alias | component *(FES1) of FRI-C transcription effector... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g43758 | No alias | component *(FES1) of FRI-C transcription effector... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0001.g000565 | No alias | component *(FES1) of FRI-C transcription effector... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g37824 | No alias | component *(FES1) of FRI-C transcription effector... | 0.02 | OrthoFinder output from all 47 species | |
| Smo439131 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g19280 | No alias | component *(FES1) of FRI-C transcription effector... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g10851 | No alias | component *(FES1) of FRI-C transcription effector... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g13648 | No alias | component *(FES1) of FRI-C transcription effector... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g20286 | No alias | component *(FES1) of FRI-C transcription effector... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e000843_P002 | Zm00001e000843 | Zinc finger CCCH domain-containing protein 55 OS=Oryza... | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e040314_P001 | Zm00001e040314 | C3H zinc finger transcription factor | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0004222 | metalloendopeptidase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |