- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : TCP12, BRC2, Solyc06g069240
Description : transcription factor (TCP)
Gene families : OG0000529 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000529_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00021p00158020 | TCP4, MEE35,... | RNA biosynthesis.transcriptional activation.TCP... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00154p00072430 | TCP13, TFPD,... | RNA biosynthesis.transcriptional activation.TCP... | 0.02 | OrthoFinder output from all 47 species | |
| AT1G68800 | TCP12, BRC2 | TCP domain protein 12 | 0.03 | OrthoFinder output from all 47 species | |
| AT3G18550 | BRC1, ATTCP18, TCP18 | TCP family transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| AT5G60970 | TCP5 | TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5 | 0.06 | OrthoFinder output from all 47 species | |
| Ala_g18510 | ATTCP24, TCP24 | TCP-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Als_g23927 | TCP13, TFPD, PTF1 | TCP-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g30415 | TCP2 | TCP-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aop_g30172 | ATTCP24, TCP24 | TCP-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene02912.t1 | ATTCP24, TCP24,... | TCP-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene02925.t1 | TCP3, Aspi01Gene02925 | TCP-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene52180.t1 | TCP3, Aspi01Gene52180 | TCP-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene62817.t1 | TCP2, Aspi01Gene62817 | TCP-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0003.g007839 | TCP5 | TCP-type transcription factor & original description: CDS=1-1389 | 0.01 | OrthoFinder output from all 47 species | |
| Azfi_s0168.g054602 | TCP3 | TCP-type transcription factor & original description: CDS=18-1559 | 0.01 | OrthoFinder output from all 47 species | |
| Azfi_s0538.g076302 | TCP3 | TCP-type transcription factor & original description: CDS=1-1575 | 0.01 | OrthoFinder output from all 47 species | |
| Cba_g37204 | TCP2 | TCP-type transcription factor & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Dde_g18891 | TCP2 | TCP-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g07001 | TCP3 | TCP-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| GSVIVT01008109001 | TCP5 | RNA biosynthesis.transcriptional activation.TCP... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01014236001 | No alias | RNA biosynthesis.transcriptional activation.TCP... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01032911001 | TCP13, TFPD, PTF1 | RNA biosynthesis.transcriptional activation.TCP... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_17863 | TCP3 | transcription factor (TCP) | 0.02 | OrthoFinder output from all 47 species | |
| Gb_30049 | TCP2 | transcription factor (TCP) | 0.01 | OrthoFinder output from all 47 species | |
| Gb_38379 | No alias | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os01g55750.1 | TCP5, LOC_Os01g55750 | transcription factor (TCP) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g49880.1 | TCP12, BRC2,... | transcription factor (TCP) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os05g43760.1 | TCP5, LOC_Os05g43760 | transcription factor (TCP) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os07g05720.1 | TCP2, LOC_Os07g05720 | transcription factor (TCP) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os12g42190.1 | ATTCP24, TCP24,... | transcription factor (TCP) | 0.03 | OrthoFinder output from all 47 species | |
| MA_101752g0010 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| MA_78665g0010 | TCP2 | transcription factor (TCP) | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g10533 | ATTCP24, TCP24 | TCP-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g41668 | TCP4, MEE35 | TCP-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g45194 | TCP2 | TCP-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g18726 | ATTCP24, TCP24 | TCP-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g077250.2.1 | TCP4, MEE35,... | transcription factor (TCP) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc02g089830.2.1 | TCP1, Solyc02g089830 | transcription factor (TCP) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g045030.2.1 | TCP12, BRC2,... | transcription factor (TCP) | 0.2 | OrthoFinder output from all 47 species | |
| Solyc04g006980.1.1 | TCP12, BRC2,... | transcription factor (TCP) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc05g009900.3.1 | TCP12, BRC2,... | transcription factor (TCP) | 0.01 | OrthoFinder output from all 47 species | |
| Solyc05g012840.1.1 | TCP4, MEE35,... | transcription factor (TCP) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e005407_P001 | TCP12, BRC2,... | transcription factor (TCP) | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e005909_P001 | TCP2, Zm00001e005909 | transcription factor (TCP) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e009811_P001 | BRC1, ATTCP18,... | transcription factor (TCP) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e011516_P001 | TCP2, Zm00001e011516 | transcription factor (TCP) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e011911_P001 | ATTCP24, TCP24,... | transcription factor (TCP) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e034097_P001 | BRC1, ATTCP18,... | transcription factor (TCP) | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| CC | GO:0005634 | nucleus | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR017887 | TF_TCP_subgr | 114 | 275 |
| No external refs found! |