Solyc06g068850.4.1 (Solyc06g068850)


Aliases : Solyc06g068850

Description : B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 87.4)


Gene families : OG0000085 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000085_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g068850.4.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g007846 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g049959 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g088948 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g110934 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15133 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g57280 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g01503 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g14219 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g19267 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g20204 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g10245 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g05824 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g11066 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g12901 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g00373 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g21975 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02597 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26125 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g28553 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g16358 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g23790 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g09240 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04078 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g09271 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g19040 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g03367 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g09065 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e015817_P001 Zm00001e015817 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e036112_P001 Zm00001e036112 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0017025 TBP-class protein binding IEP HCCA
MF GO:0140296 general transcription initiation factor binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR013989 Dev_and_cell_death_domain 61 180
IPR013989 Dev_and_cell_death_domain 291 411
No external refs found!