1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc06g068560.3.1

Solyc06g068560.3.1 (Solyc06g068560)


Aliases : Solyc06g068560

Description : small solute transporter (BT1)


Gene families : OG0002467 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002467_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g068560.3.1
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AT5G25040 No alias Major facilitator superfamily protein 0.04 OrthoFinder output from all 47 species
Aev_g48630 No alias small solute transporter *(BT1) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g22087 No alias small solute transporter *(BT1) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0448.g070690 No alias small solute transporter *(BT1) & original description:... 0.02 OrthoFinder output from all 47 species
Cba_g27869 No alias small solute transporter *(BT1) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g31756 No alias small solute transporter *(BT1) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01016099001 No alias Solute transport.carrier-mediated transport.MFS... 0.04 OrthoFinder output from all 47 species
GSVIVT01035987001 No alias Solute transport.carrier-mediated transport.MFS... 0.03 OrthoFinder output from all 47 species
LOC_Os09g25560.1 LOC_Os09g25560 small solute transporter (BT1) 0.04 OrthoFinder output from all 47 species
Spa_g24608 No alias small solute transporter *(BT1) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g26288 No alias small solute transporter *(BT1) & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP HCCA
MF GO:0016972 thiol oxidase activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR039309 BT1 57 224
IPR039309 BT1 272 457
No external refs found!