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  5. Solyc06g066540.1.1

Solyc06g066540.1.1 (TINY2, Solyc06g066540)


Aliases : TINY2, Solyc06g066540

Description : transcription factor (DREB)


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g066540.1.1
Cluster HCCA: Cluster_147

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00092590 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.05 OrthoFinder output from all 47 species
AMTR_s00025p00249140 evm_27.TU.AmTr_v1... Cell wall.cutin and suberin.biosynthesis... 0.04 OrthoFinder output from all 47 species
AMTR_s00026p00180130 evm_27.TU.AmTr_v1... Ethylene-responsive transcription factor ERF084... 0.03 OrthoFinder output from all 47 species
AMTR_s00039p00088760 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
AMTR_s00056p00064760 TINY2,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 OrthoFinder output from all 47 species
AMTR_s00095p00094910 HRD,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.05 OrthoFinder output from all 47 species
AT1G12890 No alias Integrase-type DNA-binding superfamily protein 0.04 OrthoFinder output from all 47 species
AT1G15360 WIN1, SHN1 Integrase-type DNA-binding superfamily protein 0.08 OrthoFinder output from all 47 species
AT1G77200 No alias Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G57600 No alias Integrase-type DNA-binding superfamily protein 0.05 OrthoFinder output from all 47 species
AT5G25390 SHN2 Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g00499 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene03221.t1 DEAR3, Aspi01Gene03221 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene15146.t1 Aspi01Gene15146 subgroup ERF-V transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene58502.t1 Aspi01Gene58502 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene61395.t1 RAP2.9, DEAR5,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene63662.t1 HRE2, Aspi01Gene63662 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene65526.t1 TINY2, Aspi01Gene65526 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0040.g026640 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ceric.02G066200.1 DEAR2, Ceric.02G066200 subgroup ERF-II transcription factor *(ERF19/20) &... 0.04 OrthoFinder output from all 47 species
Ceric.08G022000.1 RAP2.12, Ceric.08G022000 transcription factor component *(HRE/RAP2.12) of... 0.04 OrthoFinder output from all 47 species
Ceric.24G042900.1 DEAR2, Ceric.24G042900 subgroup ERF-II transcription factor *(ERF19/20) &... 0.04 OrthoFinder output from all 47 species
Ceric.24G043300.1 Ceric.24G043300 not classified & original description: pacid=50629223... 0.03 OrthoFinder output from all 47 species
Ceric.36G047300.1 Ceric.36G047300 not classified & original description: pacid=50568954... 0.04 OrthoFinder output from all 47 species
Dac_g33437 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dcu_g10630 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.05 OrthoFinder output from all 47 species
Dcu_g11868 SHN3 cutin and suberin biosynthesis transcription factor... 0.05 OrthoFinder output from all 47 species
GSVIVT01015540001 WIN1, SHN1 Cell wall.cutin and suberin.biosynthesis... 0.09 OrthoFinder output from all 47 species
GSVIVT01017315001 WIN1, SHN1 Cell wall.cutin and suberin.biosynthesis... 0.06 OrthoFinder output from all 47 species
GSVIVT01018272001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
GSVIVT01032983001 Rap2.6L RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
GSVIVT01035852001 SHN3 RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 OrthoFinder output from all 47 species
GSVIVT01036228001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.05 OrthoFinder output from all 47 species
Gb_03645 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.02 OrthoFinder output from all 47 species
Gb_03782 ERF-1, ATERF-1 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Gb_06962 ERF72, EBP, ATEBP, RAP2.3 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Gb_09495 RAP2.11 transcription factor (ERF). transcription factor (ERN1) 0.02 OrthoFinder output from all 47 species
Gb_12583 No alias transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Gb_20395 ERF-1, ATERF-1 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Gb_23321 ERF-1, ATERF-1 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Gb_24891 RAP2.12 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Gb_26662 ATERF3, ERF3 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Gb_32995 No alias Ethylene-responsive transcription factor ERF016... 0.02 OrthoFinder output from all 47 species
Gb_35633 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_37188 No alias transcription factor (DREB) 0.06 OrthoFinder output from all 47 species
Gb_41433 No alias transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
LOC_Os02g10760.1 WIN1, SHN1,... transcription factor (ERF). SHN-type cutin and suberin... 0.05 OrthoFinder output from all 47 species
LOC_Os02g43820.1 ERF5, ATERF-5,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
LOC_Os04g46220.1 ERF-1, ATERF-1,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
LOC_Os04g46400.1 LOC_Os04g46400 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
LOC_Os04g46410.1 ERF38, ATERF38,... transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
LOC_Os05g49700.1 LOC_Os05g49700 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
LOC_Os06g40150.1 WIN1, SHN1,... transcription factor (ERF). SHN-type cutin and suberin... 0.08 OrthoFinder output from all 47 species
LOC_Os08g45110.1 LOC_Os08g45110 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
LOC_Os11g13840.1 tny, LOC_Os11g13840 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Lfl_g20868 DEAR2 subgroup ERF-II-DEAR transcription factor & original... 0.03 OrthoFinder output from all 47 species
MA_10266433g0010 ERF-1, ATERF-1 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
MA_115502g0010 No alias transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
MA_15251g0010 tny transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
MA_214063g0010 No alias transcription factor (DREB) 0.07 OrthoFinder output from all 47 species
MA_24801g0010 No alias transcription factor (ERF) 0.05 OrthoFinder output from all 47 species
MA_47696g0010 No alias transcription factor (ERF) 0.05 OrthoFinder output from all 47 species
MA_4929994g0010 ERF2, ATERF2, ATERF-2 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
MA_54341g0010 WIN1, SHN1 transcription factor (ERF). SHN-type cutin and suberin... 0.05 OrthoFinder output from all 47 species
MA_647924g0010 No alias transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
MA_66969g0010 No alias transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
MA_912855g0010 ERF-1, ATERF-1 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
MA_924346g0010 No alias transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Ore_g42309 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Pir_g26105 RAP2.12 transcription factor component *(HRE/RAP2.12) of... 0.04 OrthoFinder output from all 47 species
Pnu_g29193 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pp3c1_5010V3.1 Pp3c1_5010 Integrase-type DNA-binding superfamily protein 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0057.g014770 No alias subgroup ERF-V transcription factor & original... 0.05 OrthoFinder output from all 47 species
Sam_g38211 No alias subgroup ERF-V transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g005630.3.1 RAP2.11, Solyc01g005630 transcription factor (ERF). transcription factor (ERN1) 0.03 OrthoFinder output from all 47 species
Solyc01g008880.3.1 CRF5, Solyc01g008880 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc01g009440.3.1 CBF4, DREB1D,... transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Solyc03g005500.1.1 ERF14, ATERF14,... transcription factor (ERF). transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Solyc03g116610.3.1 WIN1, SHN1,... transcription factor (ERF). SHN-type cutin and suberin... 0.07 OrthoFinder output from all 47 species
Solyc04g080910.1.1 Solyc04g080910 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Solyc05g050790.3.1 ATERF13, ERF13,... transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
Solyc11g011750.1.1 ERF1, ATERF1,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Zm00001e014008_P002 WIN1, SHN1,... transcription factor (ERF). SHN-type cutin and suberin... 0.06 OrthoFinder output from all 47 species
Zm00001e015327_P001 Zm00001e015327 transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
Zm00001e015946_P001 ERF110, Zm00001e015946 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e018522_P001 CBF4, DREB1D,... transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Zm00001e022016_P001 Zm00001e022016 transcription factor (DREB) 0.05 OrthoFinder output from all 47 species
Zm00001e030585_P001 WIN1, SHN1,... transcription factor (ERF). SHN-type cutin and suberin... 0.05 OrthoFinder output from all 47 species
Zm00001e034242_P001 RAP2.12, Zm00001e034242 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Zm00001e037404_P001 WIN1, SHN1,... transcription factor (ERF). SHN-type cutin and suberin... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEP HCCA
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 16 65
No external refs found!