- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : CYCA2;4, Solyc06g065680
Description : cyclin (CYCA)
Gene families : OG0001097 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001097_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00001p00272790 | CYCA3;1,... | Cell cycle.regulation.cyclins.CYCA-type cyclin | 0.09 | OrthoFinder output from all 47 species | |
| AMTR_s00068p00198800 | CYCA1;1 | Cell cycle.regulation.cyclins.CYCA-type cyclin | 0.06 | OrthoFinder output from all 47 species | |
| AT1G44110 | CYCA1;1 | Cyclin A1;1 | 0.09 | OrthoFinder output from all 47 species | |
| AT1G80370 | CYCA2;4 | Cyclin A2;4 | 0.07 | OrthoFinder output from all 47 species | |
| AT5G43080 | CYCA3;1 | Cyclin A3;1 | 0.1 | OrthoFinder output from all 47 species | |
| Adi_g023459 | CYCA1;1 | regulatory protein *(TAM) involved in metaphase to... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g039314 | CYCA2;1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g16144 | CYCA1;1 | regulatory protein *(TAM) involved in metaphase to... | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g21059 | CYCA1;1 | regulatory protein *(TAM) involved in metaphase to... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g23638 | CYCA1;1 | regulatory protein *(TAM) involved in metaphase to... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g25625 | CYCA1;1 | regulatory protein *(TAM) involved in metaphase to... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g03751 | CYCA1;1 | regulatory protein *(TAM) involved in metaphase to... | 0.04 | OrthoFinder output from all 47 species | |
| Als_g14283 | CYCA1;1 | regulatory protein *(TAM) involved in metaphase to... | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g01772 | CYCA1;1 | regulatory protein *(TAM) involved in metaphase to... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g04287 | CYCA1;1 | regulatory protein *(TAM) involved in metaphase to... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g19060 | CYCA1;1 | regulatory protein *(TAM) involved in metaphase to... | 0.06 | OrthoFinder output from all 47 species | |
| Aspi01Gene15105.t1 | CYCA1;1, Aspi01Gene15105 | regulatory protein *(TAM) involved in metaphase to... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0003.g008079 | CYCA1;1 | regulatory protein *(TAM) involved in metaphase to... | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0006.g010440 | CYCA1;1 | not classified & original description: CDS=585-2150 | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.08G046900.1 | CYCA1;1, Ceric.08G046900 | regulatory protein *(TAM) involved in metaphase to... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.30G011000.1 | CYCA1;1, Ceric.30G011000 | regulatory protein *(TAM) involved in metaphase to... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.33G050700.1 | CYCA1;1, Ceric.33G050700 | regulatory protein *(TAM) involved in metaphase to... | 0.04 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000076.67 | CYCA1;1 | Cyclin-A2-1 OS=Oryza sativa subsp. japonica | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g04219 | CYCA1;1 | regulatory protein *(TAM) involved in metaphase to... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g04793 | CYC3B, CYCA2;2, CYC2BAT | regulatory protein *(TAM) involved in metaphase to... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g31687 | CYCA1;1 | regulatory protein *(CYCA) of cell cycle & original... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01008823001 | CYCA1;1 | Cell cycle.regulation.cyclins.CYCA-type cyclin | 0.11 | OrthoFinder output from all 47 species | |
| GSVIVT01009399001 | CYCA3;1 | Cell cycle.regulation.cyclins.CYCA-type cyclin | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01035718001 | CYC3B, CYCA2;2, CYC2BAT | Cell cycle.regulation.cyclins.CYCA-type cyclin | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01037895001 | CYCA3;4 | Cell cycle.regulation.cyclins.CYCA-type cyclin | 0.03 | OrthoFinder output from all 47 species | |
| Gb_03779 | CYC3B, CYCA2;2, CYC2BAT | cyclin (CYCA) | 0.03 | OrthoFinder output from all 47 species | |
| Gb_07594 | CYC3B, CYCA2;2, CYC2BAT | cyclin (CYCA) | 0.05 | OrthoFinder output from all 47 species | |
| Gb_10619 | CYCA1;1 | cyclin (CYCA) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os01g13260.1 | CYCA1;1, LOC_Os01g13260 | cyclin (CYCA) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g41100.1 | CYCA3;1, LOC_Os03g41100 | cyclin (CYCA) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os12g31810.1 | CYCA2;4, LOC_Os12g31810 | cyclin (CYCA) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os12g39210.1 | CYCA3;4, LOC_Os12g39210 | cyclin (CYCA) | 0.11 | OrthoFinder output from all 47 species | |
| Lfl_g27348 | CYCA1;1 | regulatory protein *(TAM) involved in metaphase to... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g27435 | CYCA1;1 | regulatory protein *(CYCA) of cell cycle & original... | 0.02 | OrthoFinder output from all 47 species | |
| MA_103138g0010 | CYCA1;1 | cyclin (CYCA) | 0.06 | OrthoFinder output from all 47 species | |
| MA_28323g0010 | CYC3B, CYCA2;2, CYC2BAT | cyclin (CYCA) | 0.03 | OrthoFinder output from all 47 species | |
| MA_6619g0010 | CYCA1;1 | cyclin (CYCA) | 0.06 | OrthoFinder output from all 47 species | |
| Mp2g25500.1 | CYCA1;1 | cyclin (CYCA) | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g10135 | CYCA1;1 | regulatory protein *(TAM) involved in metaphase to... | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g12560 | CYCA1;1 | regulatory protein *(TAM) involved in metaphase to... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g06697 | CYCA1;1 | regulatory protein *(TAM) involved in metaphase to... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g24493 | CYCA1;1 | regulatory protein *(TAM) involved in metaphase to... | 0.07 | OrthoFinder output from all 47 species | |
| Ppi_g05200 | CYCA1;1 | regulatory protein *(TAM) involved in metaphase to... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g07555 | CYCA1;1 | regulatory protein *(TAM) involved in metaphase to... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g31211 | CYCA1;1 | regulatory protein *(TAM) involved in metaphase to... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g12488 | No alias | regulatory protein *(TAM) involved in metaphase to... | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g12489 | No alias | regulatory protein *(TAM) involved in metaphase to... | 0.05 | OrthoFinder output from all 47 species | |
| Smo442428 | CYCA1;1 | Cell cycle.regulation.cyclins.CYCA-type cyclin | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g11240 | CYCA1;1 | regulatory protein *(TAM) involved in metaphase to... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g11241 | CYCA1;1 | regulatory protein *(TAM) involved in metaphase to... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g11267 | CYCA1;1 | regulatory protein *(TAM) involved in metaphase to... | 0.06 | OrthoFinder output from all 47 species | |
| Spa_g30899 | CYCA1;1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g03369 | CYCA1;1 | regulatory protein *(TAM) involved in metaphase to... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g30126 | CYCA1;1 | regulatory protein *(TAM) involved in metaphase to... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e003049_P002 | CYCA3;1, Zm00001e003049 | cyclin (CYCA) | 0.1 | OrthoFinder output from all 47 species | |
| Zm00001e005138_P001 | CYCA3;1, Zm00001e005138 | cyclin (CYCA) | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e013250_P002 | CYC3B, CYCA2;2,... | cyclin (CYCA) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e017335_P001 | CYCA1;1, Zm00001e017335 | cyclin (CYCA) | 0.1 | OrthoFinder output from all 47 species | |
| Zm00001e017993_P001 | CYCA3;1, Zm00001e017993 | cyclin (CYCA) | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e026125_P002 | CYCA1;1, Zm00001e026125 | cyclin (CYCA) | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0042025 | host cell nucleus | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004518 | nuclease activity | IEP | HCCA |
| MF | GO:0004519 | endonuclease activity | IEP | HCCA |
| MF | GO:0004521 | endoribonuclease activity | IEP | HCCA |
| MF | GO:0004523 | RNA-DNA hybrid ribonuclease activity | IEP | HCCA |
| MF | GO:0004540 | ribonuclease activity | IEP | HCCA |
| MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | HCCA |
| MF | GO:0016891 | endoribonuclease activity, producing 5'-phosphomonoesters | IEP | HCCA |
| MF | GO:0016893 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| No external refs found! |