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  5. Solyc06g065050.2.1

Solyc06g065050.2.1 (Solyc06g065050)


Aliases : Solyc06g065050

Description : no hits & (original description: none)


Gene families : OG0001860 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001860_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g065050.2.1
Cluster HCCA: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
AT1G22600 No alias Late embryogenesis abundant protein (LEA) family protein 0.18 OrthoFinder output from all 47 species
AT1G72100 No alias late embryogenesis abundant domain-containing protein /... 0.29 OrthoFinder output from all 47 species
Azfi_s0094.g043407 No alias not classified & original description: CDS=1-2121 0.1 OrthoFinder output from all 47 species
Ceric.06G034100.1 Ceric.06G034100 not classified & original description: pacid=50619971... 0.07 OrthoFinder output from all 47 species
Dac_g08104 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g26332 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01001769001 No alias No description available 0.22 OrthoFinder output from all 47 species
GSVIVT01001772001 No alias No description available 0.21 OrthoFinder output from all 47 species
GSVIVT01001776001 No alias No description available 0.18 OrthoFinder output from all 47 species
LOC_Os04g35490.1 LOC_Os04g35490 no hits & (original description: none) 0.22 OrthoFinder output from all 47 species
Mp1g01170.1 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Msp_g18411 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g11067 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g60162 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g21982 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pnu_g26311 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g02252 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo440470 No alias No description available 0.06 OrthoFinder output from all 47 species
Zm00001e040896_P001 Zm00001e040896 no hits & (original description: none) 0.14 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
BP GO:0006541 glutamine metabolic process IEP HCCA
BP GO:0006542 glutamine biosynthetic process IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0051920 peroxiredoxin activity IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR025423 DUF4149 248 347
No external refs found!