1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc06g062560.2.1

Solyc06g062560.2.1 (Solyc06g062560)


Aliases : Solyc06g062560

Description : phosphocholine phosphatase


Gene families : OG0001472 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001472_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g062560.2.1
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
AT1G17710 No alias Pyridoxal phosphate phosphatase-related protein 0.04 OrthoFinder output from all 47 species
AT1G73010 ATPS2, PS2 phosphate starvation-induced gene 2 0.22 OrthoFinder output from all 47 species
Adi_g117699 No alias EC_3.1 hydrolase acting on ester bond & original... 0.07 OrthoFinder output from all 47 species
Ala_g13909 ATPS2, PS2 EC_3.1 hydrolase acting on ester bond & original... 0.04 OrthoFinder output from all 47 species
Aop_g11162 ATPS2, PS2 EC_3.1 hydrolase acting on ester bond & original... 0.07 OrthoFinder output from all 47 species
Ceric.24G021000.1 Ceric.24G021000 EC_3.1 hydrolase acting on ester bond & original... 0.06 OrthoFinder output from all 47 species
Ceric.24G021100.1 Ceric.24G021100 EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Dcu_g03530 No alias EC_3.1 hydrolase acting on ester bond & original... 0.08 OrthoFinder output from all 47 species
Dde_g48890 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01015231001 No alias Enzyme classification.EC_3 hydrolases.EC_3.1 hydrolase... 0.03 OrthoFinder output from all 47 species
GSVIVT01016881001 No alias Inorganic pyrophosphatase 2 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
GSVIVT01016883001 No alias Enzyme classification.EC_3 hydrolases.EC_3.1 hydrolase... 0.1 OrthoFinder output from all 47 species
Gb_03862 No alias phosphocholine phosphatase 0.1 OrthoFinder output from all 47 species
LOC_Os01g52230.1 ATPS2, PS2,... phosphocholine phosphatase 0.06 OrthoFinder output from all 47 species
Len_g11412 No alias EC_3.1 hydrolase acting on ester bond & original... 0.06 OrthoFinder output from all 47 species
MA_11734g0010 No alias phosphocholine phosphatase 0.05 OrthoFinder output from all 47 species
MA_8649345g0010 ATPS2, PS2 phosphocholine phosphatase 0.05 OrthoFinder output from all 47 species
MA_9506636g0010 No alias phosphocholine phosphatase 0.05 OrthoFinder output from all 47 species
Msp_g08204 ATPS2, PS2 EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Msp_g10457 No alias EC_3.1 hydrolase acting on ester bond & original... 0.04 OrthoFinder output from all 47 species
Nbi_g04046 No alias EC_3.1 hydrolase acting on ester bond & original... 0.05 OrthoFinder output from all 47 species
Ore_g05669 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Pnu_g21567 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Zm00001e019951_P001 ATPS2, PS2,... phosphocholine phosphatase 0.13 OrthoFinder output from all 47 species
Zm00001e028194_P001 ATPS2, PS2,... phosphocholine phosphatase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016791 phosphatase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006664 glycolipid metabolic process IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
BP GO:0009247 glycolipid biosynthetic process IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1903509 liposaccharide metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR016965 Pase_PHOSPHO-typ 4 232
No external refs found!