Solyc06g060420.3.1 (Solyc06g060420)


Aliases : Solyc06g060420

Description : no hits & (original description: none)


Gene families : OG0007738 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007738_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g060420.3.1

Target Alias Description ECC score Gene Family Method Actions
AT1G44835 No alias YbaK/aminoacyl-tRNA synthetase-associated domain 0.04 OrthoFinder output from all 47 species
Aev_g07143 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g00397 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0401.g068287 No alias not classified & original description: CDS=192-1070 0.02 OrthoFinder output from all 47 species
Cre10.g425950 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01008896001 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_29269 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g52880.1 LOC_Os02g52880 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g10338 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g30007 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0002161 aminoacyl-tRNA editing activity IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP HCCA
CC GO:0000439 transcription factor TFIIH core complex IEP HCCA
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP HCCA
MF GO:0004055 argininosuccinate synthase activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004525 ribonuclease III activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006289 nucleotide-excision repair IEP HCCA
BP GO:0006525 arginine metabolic process IEP HCCA
BP GO:0006526 arginine biosynthetic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP HCCA
BP GO:0015780 nucleotide-sugar transmembrane transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016289 CoA hydrolase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016790 thiolester hydrolase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901264 carbohydrate derivative transport IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR007214 YbaK/aa-tRNA-synth-assoc-dom 24 148
No external refs found!