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  5. Solyc06g054130.1.1

Solyc06g054130.1.1 (Solyc06g054130)


Aliases : Solyc06g054130

Description : no hits & (original description: none)


Gene families : OG0000771 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000771_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g054130.1.1
Cluster HCCA: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00142400 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00056p00092670 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G54095 No alias Protein of unknown function (DUF1677) 0.02 OrthoFinder output from all 47 species
AT1G79770 No alias Protein of unknown function (DUF1677) 0.02 OrthoFinder output from all 47 species
AT4G14819 No alias Protein of unknown function (DUF1677) 0.09 OrthoFinder output from all 47 species
Aev_g01868 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g23120 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g11645 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g21860 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene04896.t1 Aspi01Gene04896 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene26438.t1 Aspi01Gene26438 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g23791 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.08G030200.1 Ceric.08G030200 not classified & original description: pacid=50637544... 0.06 OrthoFinder output from all 47 species
Ceric.25G070500.1 Ceric.25G070500 not classified & original description: pacid=50594676... 0.03 OrthoFinder output from all 47 species
Dde_g23166 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01017009001 No alias No description available 0.04 OrthoFinder output from all 47 species
LOC_Os01g54170.1 LOC_Os01g54170 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os05g44410.1 LOC_Os05g44410 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g09900.1 LOC_Os06g09900 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os10g28700.1 LOC_Os10g28700 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10100606g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_140731g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_23866g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_764231g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_94444g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g42205 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g48399 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g25863 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g60384 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g12167 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g63233 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g122300.3.1 Solyc03g122300 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc08g061270.1.1 Solyc08g061270 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc09g082190.1.1 Solyc09g082190 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Spa_g02634 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g03777 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR012876 DUF1677_pln 5 91
No external refs found!