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  5. Solyc06g054080.3.1

Solyc06g054080.3.1 (CDC73, PHP, Solyc06g054080)


Aliases : CDC73, PHP, Solyc06g054080

Description : component CDC73/PHP of PAF1C transcription initiation and elongation complex


Gene families : OG0005658 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005658_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g054080.3.1

Target Alias Description ECC score Gene Family Method Actions
AT3G22590 CDC73, PHP PLANT HOMOLOGOUS TO PARAFIBROMIN 0.03 OrthoFinder output from all 47 species
Aev_g05238 CDC73, PHP component *(CDC73/PHP) of PAF1C transcription initiation... 0.02 OrthoFinder output from all 47 species
Dcu_g06268 CDC73, PHP component *(CDC73/PHP) of PAF1C transcription initiation... 0.02 OrthoFinder output from all 47 species
Ore_g40644 CDC73, PHP component *(CDC73/PHP) of PAF1C transcription initiation... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004019 adenylosuccinate synthase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR031336 CDC73_C 233 387
IPR032041 Cdc73_N 2 106
No external refs found!