Solyc06g052147.1.1 (Solyc06g052147)

Aliases : Solyc06g052147

Description : NSR RNA splicing regulator

Gene families : OG0000722 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000722_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc06g052147.1.1
Cluster	HCCA: Cluster_97

Target	Alias	Description	ECC score	Gene Family Method
Adi_g055616	No alias	RNA splicing regulator *(NSR) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g37403	No alias	RNA splicing regulator *(NSR) & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g16637	No alias	RNA splicing regulator *(NSR) & original description: none	0.02	OrthoFinder output from all 47 species
Gb_31516	No alias	NSR RNA splicing regulator	0.02	OrthoFinder output from all 47 species
Solyc06g052115.1.1	Solyc06g052115	NSR RNA splicing regulator	0.04	OrthoFinder output from all 47 species
Solyc06g052130.2.1	Solyc06g052130	NSR RNA splicing regulator	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006397	mRNA processing	IEP	HCCA
MF	GO:0008374	O-acyltransferase activity	IEP	HCCA
BP	GO:0016071	mRNA metabolic process	IEP	HCCA
BP	GO:0031123	RNA 3'-end processing	IEP	HCCA
BP	GO:0031124	mRNA 3'-end processing	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	105	173

External Links

No external refs found!