Solyc06g051800.3.1 (ATEXPA4, ATEXP4,...)


Aliases : ATEXPA4, ATEXP4, EXPA4, ATHEXP ALPHA 1.6, Solyc06g051800

Description : alpha-class expansin


Gene families : OG0000032 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g051800.3.1
Cluster HCCA: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00115760 ATEXP7, EXPA7,... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 OrthoFinder output from all 47 species
AMTR_s00001p00240270 ATEXPL2, EXPL2,... Cell wall.cell wall proteins.expansins.alpha-like-type expansin 0.03 OrthoFinder output from all 47 species
AMTR_s00002p00146900 ATHEXP BETA 3.1,... Cell wall.cell wall proteins.expansins.beta-like-type expansin 0.03 OrthoFinder output from all 47 species
AMTR_s00002p00195390 ATHEXP BETA 3.1,... Cell wall.cell wall proteins.expansins.beta-like-type expansin 0.03 OrthoFinder output from all 47 species
AMTR_s00077p00063420 EXPA8, ATHEXP... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 OrthoFinder output from all 47 species
AMTR_s00111p00059150 ATHEXP BETA 1.4,... Putative expansin-B2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT3G29030 EXP5, ATHEXP... expansin A5 0.04 OrthoFinder output from all 47 species
AT4G38400 ATEXPL2, EXPL2,... expansin-like A2 0.05 OrthoFinder output from all 47 species
AT5G05290 EXPA2, ATHEXP... expansin A2 0.04 OrthoFinder output from all 47 species
AT5G56320 ATEXP14, EXPA14,... expansin A14 0.05 OrthoFinder output from all 47 species
Adi_g007241 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g17361 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g18902 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g22661 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g32738 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Als_g11470 ATEXPA3, EXP3,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Als_g14978 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15347 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Als_g40485 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Als_g52112 EXP9, EXPA9,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Als_g52203 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g20979 EXPB3, ATEXPB3,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07935 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07936 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g13184 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g13450 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g35329 ATEXPA10,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g36017 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene03668.t1 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene03753.t1 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene03755.t1 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene03879.t1 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene14796.t1 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene40354.t1 EXPA2, ATHEXP... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene41811.t1 ATEXPA3, EXP3,... alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene41813.t1 ATEXPA3, EXP3,... alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene45683.t1 ATEXPA10,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene51050.t1 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene59827.t1 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0041.g026744 EXPA16, ATHEXP... alpha-class expansin & original description: CDS=9-821 0.03 OrthoFinder output from all 47 species
Azfi_s0043.g027126 EXPA16, ATHEXP... alpha-class expansin & original description: CDS=1-723 0.02 OrthoFinder output from all 47 species
Azfi_s0112.g045819 No alias alpha-class expansin & original description: CDS=122-925 0.04 OrthoFinder output from all 47 species
Azfi_s0206.g057815 EXPA16, ATHEXP... alpha-class expansin & original description: CDS=254-1036 0.03 OrthoFinder output from all 47 species
Azfi_s0578.g078256 EXPA16, ATHEXP... alpha-class expansin & original description: CDS=388-1158 0.03 OrthoFinder output from all 47 species
Cba_g00646 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g58517 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.05G020100.1 EXPB3, ATEXPB3,... not classified & original description: pacid=50577373... 0.03 OrthoFinder output from all 47 species
Ceric.17G039900.1 ATEXPA10,... alpha-class expansin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.17G041100.1 ATEXPA10,... alpha-class expansin & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.1Z063100.1 ATEXPA4, ATEXP4,... alpha-class expansin & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g06266 ATEXPA4, ATEXP4,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g10261 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g15610 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g16993 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g16994 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g22602 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g40575 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g18163 EXP9, EXPA9,... alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g30034 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g13980 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46781 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g01899 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g14223 EXPB3, ATEXPB3,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16058 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g16061 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01005915001 ATHEXP BETA 3.1,... Cell wall.cell wall proteins.expansins.beta-like-type expansin 0.04 OrthoFinder output from all 47 species
GSVIVT01011437001 ATEXPA10,... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.07 OrthoFinder output from all 47 species
GSVIVT01019965001 ATEXPA10,... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.06 OrthoFinder output from all 47 species
GSVIVT01033691001 ATEXPA4, ATEXP4,... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 OrthoFinder output from all 47 species
Gb_01502 EXPA8, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Gb_01504 EXPA8, ATHEXP... alpha-class expansin 0.04 OrthoFinder output from all 47 species
Gb_01505 EXPA8, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Gb_04404 EXP15, ATEXPA15,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Gb_06127 EXP15, ATEXPA15,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Gb_07437 No alias alpha-class expansin 0.04 OrthoFinder output from all 47 species
Gb_24808 ATEXLA1, EXPL1,... alpha-like-class expansin 0.02 OrthoFinder output from all 47 species
Gb_29322 ATEXLA1, EXPL1,... alpha-like-class expansin 0.03 OrthoFinder output from all 47 species
LOC_Os01g14660.1 ATHEXP ALPHA... alpha-class expansin 0.03 OrthoFinder output from all 47 species
LOC_Os01g16770.1 ATEXPA10,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
LOC_Os02g16809.1 ATEXPA11, ATHEXP... alpha-class expansin 0.02 OrthoFinder output from all 47 species
LOC_Os02g16839.1 ATEXPA11, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species
LOC_Os03g06000.1 ATEXPA11, ATHEXP... alpha-class expansin 0.04 OrthoFinder output from all 47 species
LOC_Os03g06010.1 ATEXPA11, ATHEXP... alpha-class expansin 0.04 OrthoFinder output from all 47 species
LOC_Os03g25990.1 EXP15, ATEXPA15,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
LOC_Os04g15840.1 LOC_Os04g15840 alpha-class expansin 0.02 OrthoFinder output from all 47 species
LOC_Os04g46630.1 LOC_Os04g46630 Expansin-B15 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
LOC_Os05g15690.1 ATHEXP BETA 1.4,... Expansin-B18 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
LOC_Os05g19600.1 LOC_Os05g19600 alpha-class expansin 0.04 OrthoFinder output from all 47 species
LOC_Os06g01920.1 ATEXP7, EXPA7,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
LOC_Os08g44790.1 ATEXPA3, EXP3,... alpha-class expansin 0.04 OrthoFinder output from all 47 species
LOC_Os10g30330.1 ATEXPA11, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species
LOC_Os10g30340.1 ATEXPA11, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species
LOC_Os10g39110.1 ATEXP7, EXPA7,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
LOC_Os10g39640.1 ATEXLA1, EXPL1,... alpha-like-class expansin 0.03 OrthoFinder output from all 47 species
Len_g22081 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Len_g43179 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Len_g47397 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Len_g47676 ATEXPA10,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Len_g59336 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
MA_10020g0010 ATEXPA10,... alpha-class expansin 0.04 OrthoFinder output from all 47 species
MA_130258g0010 ATEXP7, EXPA7,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
MA_184474g0010 EXPA8, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species
MA_37884g0010 EXPA8, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species
MA_387234g0010 EXPA6, ATEXP6,... Expansin-A16 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_474624g0010 EXPA8, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species
MA_4979g0010 EXPA8, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species
MA_78155g0010 EXPB1, ATEXPB1,... Expansin-B17 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Mp1g22700.1 EXP15, ATEXPA15,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Mp1g24230.1 EXP15, ATEXPA15,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Mp4g22180.1 EXP15, ATEXPA15,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Msp_g09956 ATEXPA10,... alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g23319 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g44169 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g04247 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g06079 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g08930 EXPB1, ATEXPB1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g09043 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g24717 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g33755 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43367 ATEXPA3, EXP3,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g22080 EXPB3, ATEXPB3,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g28363 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g28424 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g31032 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g05687 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06874 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g08538 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g10345 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g24739 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g30056 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g30591 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g31444 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g39288 ATEXPA10,... alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0034.g011304 EXPA8, ATHEXP... alpha-class expansin & original description: CDS=181-945 0.04 OrthoFinder output from all 47 species
Smo234188 EXPB3, ATEXPB3,... Expansin-B16 OS=Oryza sativa subsp. japonica 0.04 OrthoFinder output from all 47 species
Solyc03g115310.1.1 ATHEXP ALPHA ... alpha-class expansin 0.04 OrthoFinder output from all 47 species
Solyc06g060970.2.1 ATHEXP BETA 3.1,... beta-like-class expansin 0.03 OrthoFinder output from all 47 species
Solyc08g007090.3.1 Solyc08g007090 Expansin-like B1 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
Solyc08g007780.3.1 EXPA18, EXP18,... Putative expansin-A30 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
Solyc08g077330.3.1 ATHEXP BETA 3.1,... beta-like-class expansin 0.03 OrthoFinder output from all 47 species
Solyc08g077910.3.1 ATHEXP BETA 3.1,... beta-like-class expansin 0.04 OrthoFinder output from all 47 species
Solyc08g080060.4.1 ATEXP7, EXPA7,... alpha-class expansin 0.04 OrthoFinder output from all 47 species
Solyc09g010860.4.1 ATEXPA3, EXP3,... alpha-class expansin 0.04 OrthoFinder output from all 47 species
Solyc10g084780.3.1 EXP9, EXPA9,... alpha-class expansin 0.04 OrthoFinder output from all 47 species
Spa_g21671 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g28880 EXPB3, ATEXPB3,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g32551 EXP9, EXPA9,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g01700 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06848 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g07004 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13994 ATEXPA10,... alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g14285 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14286 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g25553 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g30407 ATEXPA1, EXP1,... alpha-class expansin & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g32125 ATEXPA1, EXP1,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002243_P002 ATEXLA3, EXPL3,... no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e003888_P001 ATEXPA3, EXP3,... alpha-class expansin 0.04 OrthoFinder output from all 47 species
Zm00001e003889_P001 ATEXPA3, EXP3,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Zm00001e014220_P001 ATEXPA11, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Zm00001e014221_P001 ATHEXP ALPHA... Expansin-A22 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Zm00001e023169_P003 ATHEXP BETA 1.1,... Putative expansin-B14 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Zm00001e036907_P001 ATHEXP BETA 1.4,... Putative expansin-B14 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
Zm00001e037914_P002 ATHEXP BETA 1.4,... Expansin-B9 OS=Zea mays (sp|q07154|expb9_maize : 487.0) 0.04 OrthoFinder output from all 47 species
Zm00001e037922_P001 ATHEXP BETA 1.4,... Expansin-B1 OS=Zea mays (sp|p58738|expb1_maize : 484.0) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004556 alpha-amylase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 168 245
IPR009009 RlpA-like_DPBB 68 157
No external refs found!