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  5. Solyc06g048510.4.1

Solyc06g048510.4.1 (ATG18D, ATATG18D,...)


Aliases : ATG18D, ATATG18D, Solyc06g048510

Description : component ATG18 of autophagosome ATG9-2-18 membrane shuttling complex


Gene families : OG0000802 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000802_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g048510.4.1

Target Alias Description ECC score Gene Family Method Actions
Pir_g14248 AtATG18a component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.02 OrthoFinder output from all 47 species
Tin_g01899 ATG18D, ATATG18D component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.03 OrthoFinder output from all 47 species
Zm00001e028371_P001 AtATG18a, Zm00001e028371 component ATG18 of autophagosome ATG9-2-18 membrane... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0006480 N-terminal protein amino acid methylation IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
BP GO:0031365 N-terminal protein amino acid modification IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!