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  5. Solyc06g009220.4.1

Solyc06g009220.4.1 (ATISA3, ISA3, Solyc06g009220)


Aliases : ATISA3, ISA3, Solyc06g009220

Description : starch debranching enzyme. starch-debranching isoamylase-type enzyme


Gene families : OG0001139 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001139_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g009220.4.1
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00166810 ATISA3, ISA3,... Carbohydrate metabolism.starch... 0.04 OrthoFinder output from all 47 species
AT1G03310 DBE1, ATISA2, BE2, ISA2 debranching enzyme 1 0.05 OrthoFinder output from all 47 species
AT4G09020 ATISA3, ISA3 isoamylase 3 0.03 OrthoFinder output from all 47 species
Azfi_s0026.g023349 ATISA1, ISA1 component *(ISA1) of ISA1-ISA2 isoamylase heterodimer &... 0.02 OrthoFinder output from all 47 species
Ceric.31G027800.1 ATISA1, ISA1,... component *(ISA1) of ISA1-ISA2 isoamylase heterodimer &... 0.04 OrthoFinder output from all 47 species
Cre03.g207713 ATISA3, ISA3 Carbohydrate metabolism.starch... 0.02 OrthoFinder output from all 47 species
GSVIVT01035168001 ATISA1, ISA1 Carbohydrate metabolism.starch... 0.06 OrthoFinder output from all 47 species
LOC_Os05g32710.1 DBE1, ATISA2,... starch debranching enzyme. starch-debranching... 0.02 OrthoFinder output from all 47 species
Lfl_g09920 ATISA3, ISA3 starch-debranching isoamylase *(ISA3) & original... 0.04 OrthoFinder output from all 47 species
Nbi_g06253 ATISA3, ISA3 starch-debranching isoamylase *(ISA3) & original... 0.04 OrthoFinder output from all 47 species
Nbi_g28992 ATISA1, ISA1 component *(ISA1) of ISA1-ISA2 isoamylase heterodimer &... 0.02 OrthoFinder output from all 47 species
Ore_g33891 DBE1, ATISA2, BE2, ISA2 component *(ISA2) of ISA1-ISA2 isoamylase heterodimer &... 0.02 OrthoFinder output from all 47 species
Ppi_g48656 ATISA3, ISA3 starch-debranching isoamylase *(ISA3) & original... 0.02 OrthoFinder output from all 47 species
Ppi_g64136 DBE1, ATISA2, BE2, ISA2 component *(ISA2) of ISA1-ISA2 isoamylase heterodimer &... 0.02 OrthoFinder output from all 47 species
Spa_g50490 ATISA3, ISA3 starch-debranching isoamylase *(ISA3) & original... 0.03 OrthoFinder output from all 47 species
Tin_g32210 DBE1, ATISA2, BE2, ISA2 component *(ISA2) of ISA1-ISA2 isoamylase heterodimer &... 0.03 OrthoFinder output from all 47 species
Zm00001e021910_P001 ATISA1, ISA1,... starch debranching enzyme. starch-debranching... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
MF GO:0003989 acetyl-CoA carboxylase activity IEP HCCA
MF GO:0004134 4-alpha-glucanotransferase activity IEP HCCA
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
MF GO:0008184 glycogen phosphorylase activity IEP HCCA
BP GO:0009314 response to radiation IEP HCCA
CC GO:0009317 acetyl-CoA carboxylase complex IEP HCCA
BP GO:0009416 response to light stimulus IEP HCCA
BP GO:0009581 detection of external stimulus IEP HCCA
BP GO:0009582 detection of abiotic stimulus IEP HCCA
BP GO:0009583 detection of light stimulus IEP HCCA
BP GO:0009584 detection of visible light IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
MF GO:0009975 cyclase activity IEP HCCA
MF GO:0009976 tocopherol cyclase activity IEP HCCA
MF GO:0016421 CoA carboxylase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
MF GO:0016872 intramolecular lyase activity IEP HCCA
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP HCCA
BP GO:0018298 obsolete protein-chromophore linkage IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
BP GO:0051606 detection of stimulus IEP HCCA
MF GO:0051920 peroxiredoxin activity IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR004193 Glyco_hydro_13_N 94 187
IPR006047 Glyco_hydro_13_cat_dom 259 615
No external refs found!