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  5. Solyc06g007360.3.1

Solyc06g007360.3.1 (Solyc06g007360)


Aliases : Solyc06g007360

Description : component RPS4 of SSU proteome


Gene families : OG0002077 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002077_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Solyc06g007360.3.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g088324 No alias component *(eS4) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Aop_g02046 No alias component *(eS4) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Dac_g14355 No alias component *(eS4) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Gb_18544 No alias component RPS4 of SSU proteome 0.04 OrthoFinder output from all 47 species
LOC_Os02g01560.1 LOC_Os02g01560 component RPS4 of SSU proteome 0.03 OrthoFinder output from all 47 species
Mp8g03290.1 No alias component RPS4 of SSU proteome 0.03 OrthoFinder output from all 47 species
Ore_g06037 No alias component *(eS4) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Ore_g42186 No alias component *(eS4) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Pp3c25_3736V3.1 Pp3c25_3736 Ribosomal protein S4 (RPS4A) family protein 0.01 OrthoFinder output from all 47 species
Zm00001e006307_P001 Zm00001e006307 component RPS4 of SSU proteome 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004486 methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity IEP HCCA
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP HCCA
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP HCCA
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
InterPro domains Description Start Stop
IPR013843 Ribosomal_S4e_N 3 39
IPR005824 KOW 177 207
IPR002942 S4_RNA-bd 43 90
IPR032277 40S_S4_C 212 258
IPR013845 Ribosomal_S4e_central_region 95 169
No external refs found!