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  5. Solyc05g056210.4.1

Solyc05g056210.4.1 (EMB1691, Solyc05g056210)


Aliases : EMB1691, Solyc05g056210

Description : Methyltransferase-like protein 1 OS=Arabidopsis thaliana (sp|q94ai4|metl1_arath : 229.0)


Gene families : OG0003540 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003540_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g056210.4.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00224260 EMB1691,... RNA processing.RNA modification.mRNA... 0.04 OrthoFinder output from all 47 species
AT4G09980 EMB1691 Methyltransferase MT-A70 family protein 0.05 OrthoFinder output from all 47 species
Adi_g116710 EMB1691 EC_2.1 transferase transferring one-carbon group &... 0.05 OrthoFinder output from all 47 species
Aspi01Gene52610.t1 EMB1691, Aspi01Gene52610 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Azfi_s0020.g015492 EMB1691 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Ehy_g04045 EMB1691 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
GSVIVT01028893001 EMB1691 RNA processing.RNA modification.mRNA... 0.03 OrthoFinder output from all 47 species
LOC_Os03g05420.1 EMB1691, LOC_Os03g05420 component MTB of adenosine N6-methyltransferase complex 0.03 OrthoFinder output from all 47 species
Len_g29364 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g14383 EMB1691 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Mp1g04450.1 EMB1691 component MTB of adenosine N6-methyltransferase complex 0.03 OrthoFinder output from all 47 species
Ore_g28859 EMB1691 EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
Spa_g21629 EMB1691 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Zm00001e000382_P001 EMB1691, Zm00001e000382 component MTB of adenosine N6-methyltransferase complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005669 transcription factor TFIID complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!