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Aliases : ATPAL2, PAL2, Solyc05g056170
Description : phenylalanine ammonia lyase (PAL)
Gene families : OG0000270 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000270_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00024p00201680 | ATPAL2, PAL2,... | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00024p00202590 | ATPAL2, PAL2,... | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.05 | OrthoFinder output from all 47 species | |
| AMTR_s00032p00159210 | PAL4,... | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00148p00088930 | ATPAL1, PAL1,... | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.1 | OrthoFinder output from all 47 species | |
| AT2G37040 | ATPAL1, PAL1 | PHE ammonia lyase 1 | 0.09 | OrthoFinder output from all 47 species | |
| AT3G53260 | ATPAL2, PAL2 | phenylalanine ammonia-lyase 2 | 0.07 | OrthoFinder output from all 47 species | |
| Adi_g015318 | ATPAL1, PAL1 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Adi_g018720 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g022753 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g059368 | ATPAL1, PAL1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g084112 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g107843 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g107906 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g01488 | ATPAL1, PAL1 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g15105 | ATPAL1, PAL1 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g39212 | ATPAL1, PAL1 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g39213 | ATPAL1, PAL1 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g24727 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g06672 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g23707 | ATPAL2, PAL2 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g02564 | ATPAL1, PAL1 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene18088.t1 | ATPAL1, PAL1,... | EC_4.3 carbon-nitrogen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene18089.t1 | ATPAL1, PAL1,... | EC_4.3 carbon-nitrogen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene20030.t1 | PAL4, Aspi01Gene20030 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0009.g011807 | ATPAL1, PAL1 | EC_4.3 carbon-nitrogen lyase & original description: CDS=1-2211 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0096.g043679 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: CDS=1-2310 | 0.06 | OrthoFinder output from all 47 species | |
| Azfi_s0163.g054246 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: CDS=1-2322 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0205.g057722 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: CDS=1-2322 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g03360 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g22478 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g28767 | ATPAL1, PAL1 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.14G035000.1 | PAL4, Ceric.14G035000 | EC_4.3 carbon-nitrogen lyase & original description:... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.14G035200.1 | PAL4, Ceric.14G035200 | EC_4.3 carbon-nitrogen lyase & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g08062 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g09400 | ATPAL1, PAL1 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g23175 | ATPAL1, PAL1 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g40579 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g01768 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| Dcu_g24302 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g36866 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g17566 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g04952 | ATPAL1, PAL1 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g07006 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g25215 | ATPAL1, PAL1 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01006148001 | PAL4 | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01016257001 | ATPAL2, PAL2 | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01024295001 | ATPAL1, PAL1 | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01025214001 | ATPAL1, PAL1 | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.11 | OrthoFinder output from all 47 species | |
| GSVIVT01025703001 | ATPAL2, PAL2 | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.12 | OrthoFinder output from all 47 species | |
| Gb_01672 | ATPAL2, PAL2 | phenylalanine ammonia lyase (PAL) | 0.02 | OrthoFinder output from all 47 species | |
| Gb_16672 | ATPAL1, PAL1 | phenylalanine ammonia lyase (PAL) | 0.03 | OrthoFinder output from all 47 species | |
| Gb_25608 | ATPAL1, PAL1 | phenylalanine ammonia lyase (PAL) | 0.07 | OrthoFinder output from all 47 species | |
| Gb_31408 | PAL4 | phenylalanine ammonia lyase (PAL) | 0.03 | OrthoFinder output from all 47 species | |
| Gb_41796 | PAL4 | phenylalanine ammonia lyase (PAL) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g41630.2 | ATPAL1, PAL1,... | phenylalanine ammonia lyase (PAL) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os02g41650.3 | ATPAL1, PAL1,... | phenylalanine ammonia lyase (PAL) | 0.12 | OrthoFinder output from all 47 species | |
| LOC_Os02g41670.1 | ATPAL1, PAL1,... | phenylalanine ammonia lyase (PAL) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os02g41680.1 | ATPAL1, PAL1,... | phenylalanine ammonia lyase (PAL) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os04g43760.1 | ATPAL1, PAL1,... | phenylalanine ammonia lyase (PAL) | 0.09 | OrthoFinder output from all 47 species | |
| LOC_Os04g43800.1 | ATPAL1, PAL1,... | phenylalanine ammonia lyase (PAL) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os05g35290.1 | ATPAL1, PAL1,... | phenylalanine ammonia lyase (PAL) | 0.03 | OrthoFinder output from all 47 species | |
| Len_g07383 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g49566 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g50108 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g14564 | ATPAL1, PAL1 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| MA_123220g0010 | ATPAL2, PAL2 | phenylalanine ammonia lyase (PAL) | 0.04 | OrthoFinder output from all 47 species | |
| MA_73113g0010 | PAL4 | phenylalanine ammonia lyase (PAL) | 0.04 | OrthoFinder output from all 47 species | |
| Mp1g05190.1 | ATPAL1, PAL1 | phenylalanine ammonia lyase (PAL) | 0.02 | OrthoFinder output from all 47 species | |
| Mp4g14110.1 | ATPAL1, PAL1 | phenylalanine ammonia lyase (PAL) | 0.02 | OrthoFinder output from all 47 species | |
| Mp4g14130.1 | ATPAL2, PAL2 | Phenylalanine ammonia-lyase class 1 (Fragment)... | 0.02 | OrthoFinder output from all 47 species | |
| Mp4g14140.1 | ATPAL1, PAL1 | phenylalanine ammonia lyase (PAL) | 0.03 | OrthoFinder output from all 47 species | |
| Mp4g14160.1 | ATPAL2, PAL2 | phenylalanine ammonia lyase (PAL) | 0.04 | OrthoFinder output from all 47 species | |
| Mp4g14170.1 | PAL4 | phenylalanine ammonia lyase (PAL) | 0.03 | OrthoFinder output from all 47 species | |
| Mp7g14880.1 | ATPAL1, PAL1 | phenylalanine ammonia lyase (PAL) | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g20938 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g37393 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g08420 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g04296 | ATPAL1, PAL1 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g10300 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g16429 | ATPAL2, PAL2 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g25845 | ATPAL1, PAL1 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g35799 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g40543 | ATPAL1, PAL1 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g40658 | ATPAL1, PAL1 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c10_21810V3.1 | PAL4, Pp3c10_21810 | phenylalanine ammonia-lyase 4 | 0.01 | OrthoFinder output from all 47 species | |
| Pp3c21_7640V3.1 | ATPAL2, PAL2, Pp3c21_7640 | phenylalanine ammonia-lyase 2 | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c24_13110V3.1 | PAL4, Pp3c24_13110 | phenylalanine ammonia-lyase 4 | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g16617 | ATPAL2, PAL2 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g30570 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0091.g018764 | ATPAL1, PAL1 | EC_4.3 carbon-nitrogen lyase & original description: CDS=1-2271 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0157.g023741 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: CDS=1-1545 | 0.02 | OrthoFinder output from all 47 species | |
| Solyc10g011930.1.1 | ATPAL1, PAL1,... | Phenylalanine ammonia-lyase OS=Solanum lycopersicum... | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g08001 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g26458 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Tin_g03458 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g08349 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g10052 | PAL4 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g14732 | ATPAL1, PAL1 | EC_4.3 carbon-nitrogen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e007572_P001 | ATPAL1, PAL1,... | phenylalanine ammonia lyase (PAL) | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e015155_P001 | ATPAL1, PAL1,... | phenylalanine ammonia lyase (PAL) | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e015157_P001 | ATPAL1, PAL1,... | phenylalanine ammonia lyase (PAL) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e023031_P002 | PAL4, Zm00001e023031 | phenylalanine ammonia lyase (PAL) | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e023032_P002 | ATPAL1, PAL1,... | phenylalanine ammonia lyase (PAL) | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e023033_P001 | ATPAL1, PAL1,... | phenylalanine ammonia lyase (PAL) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0003855 | 3-dehydroquinate dehydratase activity | IEP | HCCA |
| MF | GO:0004672 | protein kinase activity | IEP | HCCA |
| MF | GO:0004764 | shikimate 3-dehydrogenase (NADP+) activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005506 | iron ion binding | IEP | HCCA |
| BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
| BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0008171 | O-methyltransferase activity | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| MF | GO:0016301 | kinase activity | IEP | HCCA |
| BP | GO:0016310 | phosphorylation | IEP | HCCA |
| MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
| MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | HCCA |
| MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | HCCA |
| MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
| MF | GO:0016829 | lyase activity | IEP | HCCA |
| MF | GO:0016830 | carbon-carbon lyase activity | IEP | HCCA |
| MF | GO:0016831 | carboxy-lyase activity | IEP | HCCA |
| MF | GO:0016835 | carbon-oxygen lyase activity | IEP | HCCA |
| MF | GO:0016836 | hydro-lyase activity | IEP | HCCA |
| MF | GO:0016887 | ATP hydrolysis activity | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| MF | GO:0019842 | vitamin binding | IEP | HCCA |
| MF | GO:0020037 | heme binding | IEP | HCCA |
| MF | GO:0030170 | pyridoxal phosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0036211 | protein modification process | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0043412 | macromolecule modification | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| MF | GO:0046906 | tetrapyrrole binding | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
| BP | GO:0055114 | obsolete oxidation-reduction process | IEP | HCCA |
| MF | GO:0070279 | vitamin B6 binding | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001106 | Aromatic_Lyase | 61 | 533 |
| No external refs found! |