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  5. Solyc05g054720.3.1

Solyc05g054720.3.1 (TIC20, Solyc05g054720)


Aliases : TIC20, Solyc05g054720

Description : component Tic20-I/IV of inner envelope TIC-20 complex


Gene families : OG0005319 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005319_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g054720.3.1
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AT1G04940 TIC20 translocon at the inner envelope membrane of chloroplasts 20 0.03 OrthoFinder output from all 47 species
Adi_g050694 TIC20 component *(Tic20-I/IV) of inner envelope TIC-20 complex... 0.03 OrthoFinder output from all 47 species
Als_g04203 TIC20 component *(Tic20-I/IV) of inner envelope TIC-20 complex... 0.04 OrthoFinder output from all 47 species
Ceric.01G050900.1 TIC20, Ceric.01G050900 component *(Tic20-I/IV) of inner envelope TIC-20 complex... 0.05 OrthoFinder output from all 47 species
Cre08.g379650 TIC20 Protein translocation.chloroplast.inner envelope TIC... 0.02 OrthoFinder output from all 47 species
GSVIVT01009769001 TIC20 Protein translocation.chloroplast.inner envelope TIC... 0.07 OrthoFinder output from all 47 species
LOC_Os07g38110.1 LOC_Os07g38110 component Tic20-I/IV of inner envelope TIC-20 complex 0.05 OrthoFinder output from all 47 species
Len_g09873 TIC20 component *(Tic20-I/IV) of inner envelope TIC-20 complex... 0.02 OrthoFinder output from all 47 species
Mp3g05820.1 TIC20 component Tic20-I/IV of inner envelope TIC-20 complex 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0038.g012041 TIC20 component *(Tic20-I/IV) of inner envelope TIC-20 complex... 0.05 OrthoFinder output from all 47 species
Zm00001e035290_P002 TIC20, Zm00001e035290 component Tic20-I/IV of inner envelope TIC-20 complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004019 adenylosuccinate synthase activity IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR005691 Tic20 93 264
No external refs found!