Solyc05g054260.3.1 (ATKINESIN-13A,...)

Aliases : ATKINESIN-13A, KINESIN-13A, Solyc05g054260

Description : microtubule destabilizing motor protein (Kinesin-13). motor protein (Kinesin-13)

Gene families : OG0001277 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001277_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc05g054260.3.1

Target	Alias	Description	ECC score	Gene Family Method
AT3G16630	ATKINESIN-13A,...	P-loop containing nucleoside triphosphate hydrolases...	0.05	OrthoFinder output from all 47 species
Adi_g020310	ATKINESIN-13A,...	Kinesin-13-type motor protein & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g060206	ATKINESIN-13A,...	Kinesin-13-type motor protein & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g060207	ATKINESIN-13A,...	Kinesin-13-type motor protein & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g112685	ATKINESIN-13A,...	Kinesin-13-type motor protein & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g27801	ATKINESIN-13A,...	Kinesin-13-type motor protein & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g16224	ATKINESIN-13A,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01017727001	ATKINESIN-13A,...	Cytoskeleton.microtubular network.Kinesin...	0.02	OrthoFinder output from all 47 species
LOC_Os05g06280.1	ATKINESIN-13A,...	microtubule destabilizing motor protein (Kinesin-13)....	0.07	OrthoFinder output from all 47 species
Len_g18925	ATKINESIN-13A,...	Kinesin-13-type motor protein & original description: none	0.02	OrthoFinder output from all 47 species
MA_10429022g0010	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
MA_10432144g0020	ATKINESIN-13A,...	microtubule destabilizing motor protein (Kinesin-13)....	0.08	OrthoFinder output from all 47 species
Mp1g23880.1	ATKINESIN-13A,...	microtubule destabilizing motor protein (Kinesin-13)....	0.02	OrthoFinder output from all 47 species
Ppi_g06495	ATKINESIN-13A,...	Kinesin-13-type motor protein & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g50185	ATKINESIN-13A,...	Kinesin-13-type motor protein & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e026282_P001	ATKINESIN-13A,...	microtubule destabilizing motor protein (Kinesin-13)....	0.06	OrthoFinder output from all 47 species
Zm00001e026744_P001	ATKINESIN-13A,...	microtubule destabilizing motor protein (Kinesin-13)....	0.03	OrthoFinder output from all 47 species
Zm00001e031148_P001	ATKINESIN-13A,...	microtubule destabilizing motor protein (Kinesin-13)....	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003774	cytoskeletal motor activity	None	Extended
MF	GO:0003777	microtubule motor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0007017	microtubule-based process	None	Extended
BP	GO:0007018	microtubule-based movement	IEA	Interproscan
MF	GO:0008017	microtubule binding	IEA	Interproscan
MF	GO:0008092	cytoskeletal protein binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015631	tubulin binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005215	transporter activity	IEP	HCCA
CC	GO:0005575	cellular_component	IEP	HCCA
BP	GO:0006605	protein targeting	IEP	HCCA
BP	GO:0006612	protein targeting to membrane	IEP	HCCA
BP	GO:0006613	cotranslational protein targeting to membrane	IEP	HCCA
BP	GO:0006614	SRP-dependent cotranslational protein targeting to membrane	IEP	HCCA
BP	GO:0006810	transport	IEP	HCCA
BP	GO:0006811	monoatomic ion transport	IEP	HCCA
BP	GO:0006812	monoatomic cation transport	IEP	HCCA
BP	GO:0006813	potassium ion transport	IEP	HCCA
BP	GO:0006886	intracellular protein transport	IEP	HCCA
BP	GO:0008104	protein localization	IEP	HCCA
MF	GO:0008312	7S RNA binding	IEP	HCCA
MF	GO:0008324	monoatomic cation transmembrane transporter activity	IEP	HCCA
BP	GO:0015031	protein transport	IEP	HCCA
MF	GO:0015075	monoatomic ion transmembrane transporter activity	IEP	HCCA
MF	GO:0015078	proton transmembrane transporter activity	IEP	HCCA
MF	GO:0015079	potassium ion transmembrane transporter activity	IEP	HCCA
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
BP	GO:0016197	endosomal transport	IEP	HCCA
BP	GO:0016482	cytosolic transport	IEP	HCCA
MF	GO:0022857	transmembrane transporter activity	IEP	HCCA
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	HCCA
BP	GO:0030001	metal ion transport	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
BP	GO:0033036	macromolecule localization	IEP	HCCA
CC	GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain	IEP	HCCA
CC	GO:0033179	proton-transporting V-type ATPase, V0 domain	IEP	HCCA
BP	GO:0033365	protein localization to organelle	IEP	HCCA
BP	GO:0034220	monoatomic ion transmembrane transport	IEP	HCCA
BP	GO:0042147	retrograde transport, endosome to Golgi	IEP	HCCA
BP	GO:0045047	protein targeting to ER	IEP	HCCA
BP	GO:0045184	establishment of protein localization	IEP	HCCA
MF	GO:0046873	metal ion transmembrane transporter activity	IEP	HCCA
BP	GO:0046907	intracellular transport	IEP	HCCA
CC	GO:0048500	signal recognition particle	IEP	HCCA
BP	GO:0051179	localization	IEP	HCCA
BP	GO:0051234	establishment of localization	IEP	HCCA
BP	GO:0051641	cellular localization	IEP	HCCA
BP	GO:0051649	establishment of localization in cell	IEP	HCCA
BP	GO:0051668	localization within membrane	IEP	HCCA
BP	GO:0055085	transmembrane transport	IEP	HCCA
BP	GO:0070727	cellular macromolecule localization	IEP	HCCA
BP	GO:0070972	protein localization to endoplasmic reticulum	IEP	HCCA
BP	GO:0071805	potassium ion transmembrane transport	IEP	HCCA
BP	GO:0072594	establishment of protein localization to organelle	IEP	HCCA
BP	GO:0072599	establishment of protein localization to endoplasmic reticulum	IEP	HCCA
BP	GO:0072657	protein localization to membrane	IEP	HCCA
BP	GO:0090150	establishment of protein localization to membrane	IEP	HCCA
BP	GO:0098655	monoatomic cation transmembrane transport	IEP	HCCA
BP	GO:0098660	inorganic ion transmembrane transport	IEP	HCCA
BP	GO:0098662	inorganic cation transmembrane transport	IEP	HCCA
BP	GO:1902600	proton transmembrane transport	IEP	HCCA
CC	GO:1990904	ribonucleoprotein complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001752	Kinesin_motor_dom	202	529

External Links

No external refs found!

Solyc05g054260.3.1 (ATKINESIN-13A,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation