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  5. Solyc05g054100.3.1

Solyc05g054100.3.1 (Solyc05g054100)


Aliases : Solyc05g054100

Description : no hits & (original description: none)


Gene families : OG0006364 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006364_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g054100.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00055p00182870 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT4G12590 No alias Protein of unknown function DUF106, transmembrane 0.04 OrthoFinder output from all 47 species
Ceric.10G075500.1 Ceric.10G075500 not classified & original description: pacid=50613374... 0.03 OrthoFinder output from all 47 species
Cre09.g400400 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_17172 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os09g32220.1 LOC_Os09g32220 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Mp1g01850.1 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Msp_g02332 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
CC GO:0005750 mitochondrial respiratory chain complex III IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009060 aerobic respiration IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0015980 energy derivation by oxidation of organic compounds IEP HCCA
BP GO:0019646 aerobic electron transport chain IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0022904 respiratory electron transport chain IEP HCCA
MF GO:0032977 membrane insertase activity IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
CC GO:0045275 respiratory chain complex III IEP HCCA
BP GO:0045333 cellular respiration IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140597 protein carrier chaperone IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1902495 transmembrane transporter complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
CC GO:1990351 transporter complex IEP HCCA
InterPro domains Description Start Stop
IPR002809 EMC3/TMCO1 46 235
No external refs found!