Solyc05g053690.2.1 (UBP2, ATUBP2, Solyc05g053690)

Aliases : UBP2, ATUBP2, Solyc05g053690

Description : deubiquitinase (UBP1-2)

Gene families : OG0782084 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: Solyc05g053690.2.1
Cluster HCCA: Cluster_25

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
BP GO:0016579 protein deubiquitination IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR001394 Peptidase_C19_UCH 230 972
IPR001607 Znf_UBP 74 165
No external refs found!