Solyc05g050360.3.1 (ATCNGC1, CNGC1, Solyc05g050360)

Aliases : ATCNGC1, CNGC1, Solyc05g050360

Description : cyclic nucleotide-gated cation channel (CNGC)

Gene families : OG0000170 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000170_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc05g050360.3.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00210p00019190	CNGC5, ATCNGC5,...	Solute transport.channels.VIC superfamily.cyclic...	0.04	OrthoFinder output from all 47 species
AT2G24610	ATCNGC14, CNGC14	cyclic nucleotide-gated channel 14	0.03	OrthoFinder output from all 47 species
AT2G28260	CNGC15, ATCNGC15	cyclic nucleotide-gated channel 15	0.03	OrthoFinder output from all 47 species
AT2G46430	ATCNGC3, CNGC3, CNGC3.C	cyclic nucleotide gated channel 3	0.17	OrthoFinder output from all 47 species
AT2G46440	CNGC11, ATCNGC11	cyclic nucleotide-gated channels	0.11	OrthoFinder output from all 47 species
AT2G46450	ATCNGC12, CNGC12	cyclic nucleotide-gated channel 12	0.03	OrthoFinder output from all 47 species
AT3G17700	ATCNGC20, CNGC20, CNBT1	cyclic nucleotide-binding transporter 1	0.15	OrthoFinder output from all 47 species
AT4G01010	ATCNGC13, CNGC13	cyclic nucleotide-gated channel 13	0.11	OrthoFinder output from all 47 species
AT5G57940	CNGC5, ATCNGC5	cyclic nucleotide gated channel 5	0.03	OrthoFinder output from all 47 species
Ala_g05813	ATCNGC20, CNGC20, CNBT1	cyclic nucleotide-gated cation channel *(CNGC) &...	0.02	OrthoFinder output from all 47 species
Ala_g24844	ATCNGC20, CNGC20, CNBT1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0147.g053030	ATCNGC20, CNGC20, CNBT1	cyclic nucleotide-gated cation channel *(CNGC) &...	0.02	OrthoFinder output from all 47 species
Azfi_s0301.g063721	CNGC15, ATCNGC15	cyclic nucleotide-gated cation channel *(CNGC) &...	0.04	OrthoFinder output from all 47 species
Ceric.23G068600.1	CNGC15,...	cyclic nucleotide-gated cation channel *(CNGC) &...	0.04	OrthoFinder output from all 47 species
Dac_g07103	ATCNGC20, CNGC20, CNBT1	cyclic nucleotide-gated cation channel *(CNGC) &...	0.04	OrthoFinder output from all 47 species
Dac_g14388	CNGC15, ATCNGC15	cyclic nucleotide-gated cation channel *(CNGC) &...	0.03	OrthoFinder output from all 47 species
Dcu_g26407	DND1, ATCNGC2, CNGC2	temperature sensor protein *(CNGC2) & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01025208001	CNGC15, ATCNGC15	Solute transport.channels.VIC superfamily.cyclic...	0.06	OrthoFinder output from all 47 species
GSVIVT01027087001	ATCNGC1, CNGC1	Solute transport.channels.VIC superfamily.cyclic...	0.08	OrthoFinder output from all 47 species
GSVIVT01028711001	ATCNGC1, CNGC1	Solute transport.channels.VIC superfamily.cyclic...	0.04	OrthoFinder output from all 47 species
GSVIVT01029404001	ATCNGC20, CNGC20, CNBT1	Solute transport.channels.VIC superfamily.cyclic...	0.07	OrthoFinder output from all 47 species
GSVIVT01029407001	ATCNGC20, CNGC20, CNBT1	Solute transport.channels.VIC superfamily.cyclic...	0.04	OrthoFinder output from all 47 species
LOC_Os02g41710.1	CNGC15,...	cyclic nucleotide-gated cation channel (CNGC)	0.03	OrthoFinder output from all 47 species
LOC_Os02g54760.1	ATCNGC17,...	cyclic nucleotide-gated cation channel (CNGC)	0.03	OrthoFinder output from all 47 species
LOC_Os06g10580.1	ATCNGC20,...	cyclic nucleotide-gated cation channel (CNGC)	0.05	OrthoFinder output from all 47 species
Mp3g14660.1	DND2, CNGC4,...	cyclic nucleotide-gated cation channel (CNGC)	0.03	OrthoFinder output from all 47 species
Msp_g24602	ATCNGC20, CNGC20, CNBT1	cyclic nucleotide-gated cation channel *(CNGC) &...	0.03	OrthoFinder output from all 47 species
Msp_g26614	DND1, ATCNGC2, CNGC2	temperature sensor protein *(CNGC2) & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g01203	CNGC15, ATCNGC15	cyclic nucleotide-gated cation channel *(CNGC) &...	0.02	OrthoFinder output from all 47 species
Pir_g29423	ATCNGC1, CNGC1	cyclic nucleotide-gated cation channel *(CNGC) &...	0.03	OrthoFinder output from all 47 species
Pir_g33867	ATCNGC10, CNGC10, ACBK1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g37152	ATCNGC1, CNGC1	cyclic nucleotide-gated cation channel *(CNGC) &...	0.03	OrthoFinder output from all 47 species
Pir_g44974	ATCNGC1, CNGC1	cyclic nucleotide-gated cation channel *(CNGC) &...	0.02	OrthoFinder output from all 47 species
Pir_g52371	CNGC5, ATCNGC5	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g18670	ATCNGC20, CNGC20, CNBT1	cyclic nucleotide-gated cation channel *(CNGC) &...	0.02	OrthoFinder output from all 47 species
Ppi_g05274	ATCNGC9, CNGC9	cyclic nucleotide-gated cation channel *(CNGC) &...	0.03	OrthoFinder output from all 47 species
Ppi_g16467	ATCNGC20, CNGC20, CNBT1	cyclic nucleotide-gated cation channel *(CNGC) &...	0.01	OrthoFinder output from all 47 species
Smo113786	ATCNGC9, CNGC9	Solute transport.channels.VIC superfamily.cyclic...	0.02	OrthoFinder output from all 47 species
Smo416791	DND1, ATCNGC2, CNGC2	External stimuli response.temperature.temperature...	0.02	OrthoFinder output from all 47 species
Solyc11g069580.2.1	CNGC15,...	cyclic nucleotide-gated cation channel (CNGC)	0.03	OrthoFinder output from all 47 species
Tin_g03478	ATCNGC8, CNGC8	cyclic nucleotide-gated cation channel *(CNGC) &...	0.02	OrthoFinder output from all 47 species
Zm00001e016088_P002	ATCNGC17,...	cyclic nucleotide-gated cation channel (CNGC)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	monoatomic ion channel activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	monoatomic ion transport	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0004672	protein kinase activity	IEP	HCCA
MF	GO:0004674	protein serine/threonine kinase activity	IEP	HCCA
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
BP	GO:0008037	cell recognition	IEP	HCCA
BP	GO:0008152	metabolic process	IEP	HCCA
MF	GO:0015276	ligand-gated monoatomic ion channel activity	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
BP	GO:0016567	protein ubiquitination	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	HCCA
MF	GO:0022834	ligand-gated channel activity	IEP	HCCA
MF	GO:0022836	gated channel activity	IEP	HCCA
MF	GO:0022839	monoatomic ion gated channel activity	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
BP	GO:0032446	protein modification by small protein conjugation	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
BP	GO:0044237	cellular metabolic process	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
BP	GO:0048544	recognition of pollen	IEP	HCCA
BP	GO:0071704	organic substance metabolic process	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA
BP	GO:1901564	organonitrogen compound metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000595	cNMP-bd_dom	514	611
IPR005821	Ion_trans_dom	100	416

External Links

No external refs found!

Solyc05g050360.3.1 (ATCNGC1, CNGC1, Solyc05g050360)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation