Solyc05g050220.3.1 (GBF3, Solyc05g050220)

Aliases : GBF3, Solyc05g050220

Description : transcription factor (bZIP)

Gene families : OG0000424 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000424_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc05g050220.3.1

Target	Alias	Description	ECC score	Gene Family Method
AT2G46270	GBF3	G-box binding factor 3	0.08	OrthoFinder output from all 47 species
Ala_g12488	bZIP68, AtbZIP68	bZIP class-G transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g12705	bZIP68, AtbZIP68	myosin adaptor protein *(MadA) & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g20426	bZIP68, AtbZIP68	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Cba_g46563	ATBZIP54, GBF2	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Cba_g78269	bZIP16, AtbZIP16	bZIP class-G transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Dac_g38585	GBF3	bZIP class-G transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g44975	bZIP16, AtbZIP16	bZIP class-G transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g22286	bZIP68, AtbZIP68	not classified & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01027040001	GBF3	RNA biosynthesis.transcriptional activation.bZIP...	0.08	OrthoFinder output from all 47 species
Gb_35962	GBF3	transcription factor (bZIP)	0.04	OrthoFinder output from all 47 species
Msp_g15597	bZIP68, AtbZIP68	bZIP class-G transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g12749	bZIP68, AtbZIP68	bZIP class-G transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g42844	bZIP68, AtbZIP68	bZIP class-G transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g18997	bZIP68, AtbZIP68	myosin adaptor protein *(MadA) & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g15169	bZIP68, AtbZIP68	bZIP class-G transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Ppi_g57439	bZIP16, AtbZIP16	bZIP class-G transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000175	bZIP16, AtbZIP16	bZIP class-G transcription factor & original...	0.01	OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011550	bZIP16, AtbZIP16	bZIP class-G transcription factor & original...	0.01	OrthoFinder output from all 47 species
Spa_g03318	bZIP16, AtbZIP16	bZIP class-G transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g09715	bZIP16, AtbZIP16	bZIP class-G transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g12813	bZIP16, AtbZIP16	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Zm00001e032476_P001	GBF3, Zm00001e032476	transcription factor (bZIP)	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR004827	bZIP	273	335
IPR012900	MFMR	1	93

External Links

No external refs found!

Solyc05g050220.3.1 (GBF3, Solyc05g050220)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation