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  5. Solyc05g050110.3.1

Solyc05g050110.3.1 (Solyc05g050110)


Aliases : Solyc05g050110

Description : no hits & (original description: none)


Gene families : OG0002005 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002005_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g050110.3.1

Target Alias Description ECC score Gene Family Method Actions
Aev_g12032 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g18667 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g01620 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g60853 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g06631 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g11398 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g10474 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g21478 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02222 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os01g12200.1 LOC_Os01g12200 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os05g12474.1 LOC_Os05g12474 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g01084 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g03130 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g10895 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g15153 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g17265 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e006957_P001 Zm00001e006957 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP HCCA
MF GO:0008519 ammonium transmembrane transporter activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
CC GO:0030286 dynein complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR018790 DUF2358 80 190
No external refs found!