1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc05g048800.3.1

Solyc05g048800.3.1 (Solyc05g048800)


Aliases : Solyc05g048800

Description : no hits & (original description: none)


Gene families : OG0000607 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000607_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g048800.3.1
Cluster HCCA: Cluster_142

Target Alias Description ECC score Gene Family Method Actions
AT1G07220 No alias Arabidopsis thaliana protein of unknown function (DUF821) 0.03 OrthoFinder output from all 47 species
AT2G45830 DTA2 downstream target of AGL15 2 0.02 OrthoFinder output from all 47 species
Aspi01Gene66551.t1 Aspi01Gene66551 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01026877001 No alias No description available 0.06 OrthoFinder output from all 47 species
GSVIVT01026878001 No alias No description available 0.04 OrthoFinder output from all 47 species
LOC_Os05g05690.1 LOC_Os05g05690 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_689724g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc03g025770.4.1 Solyc03g025770 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004866 endopeptidase inhibitor activity IEP HCCA
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP HCCA
BP GO:0006835 dicarboxylic acid transport IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015740 C4-dicarboxylate transport IEP HCCA
BP GO:0015743 malate transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
MF GO:0030414 peptidase inhibitor activity IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
MF GO:0061134 peptidase regulator activity IEP HCCA
MF GO:0061135 endopeptidase regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR006598 CAP10 98 219
IPR006598 CAP10 54 89
No external refs found!