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  5. Solyc05g046040.2.1

Solyc05g046040.2.1 (Solyc05g046040)


Aliases : Solyc05g046040

Description : transcription factor (BBX-CO)


Gene families : OG0001549 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001549_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g046040.2.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00172870 COL9,... RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
AT1G05290 No alias CCT motif family protein 0.04 OrthoFinder output from all 47 species
AT3G21880 No alias B-box type zinc finger protein with CCT domain 0.04 OrthoFinder output from all 47 species
AT4G15250 No alias B-box type zinc finger protein with CCT domain 0.07 OrthoFinder output from all 47 species
Pir_g45459 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP HCCA
MF GO:0008417 fucosyltransferase activity IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP HCCA
BP GO:0042546 cell wall biogenesis IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR010402 CCT_domain 363 405
No external refs found!